Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_030918.1 Length=36629 Score E Sequences producing significant alignments: (Bits) Value seq38063 116 9e-22 seq142977 91.5 3e-14 seq139399 82.4 2e-11 >seq38063 Length=1017 Score = 116 bits (128), Expect = 9e-22 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15066 AACGAGCTGCGGCTGCGCGACAACAGCCCGGCCGGCGAAGCCTTGCAGCCCTTCGGCTGG 15125 ||||||||||| ||||||||||||||| | | || ||| | | ||| || |||||| Sbjct 766 AACGAGCTGCGCCTGCGCGACAACAGCGCCGATGGAGAATCGCTCTGGCCGTTTGGCTGG 825 Query 15126 ATCATTCACCGGCCGCGTGCGCGCTCCGGCTATGTGGCCCGCAGCGGCCTGTTCCGCGTG 15185 ||||| ||| || || ||||| |||||| | ||||||| || ||||| || || Sbjct 826 ATCATGCACACGCACCGCTCGCGCAGCGGCTACATCGCCCGCACGGGTCTGTTTCGGGTA 885 Query 15186 CTGGCCTGGCCGTACCTGTTCCGCCACTACGCCACCTCCGACCTGGCGGAAATGCTGGAA 15245 || |||||||||| || ||| ||| ||| ||||||||| || | ||||| Sbjct 886 CTCGCCTGGCCGTGGCTCTTCAAGAACTTTGCCGTGCGCGACCTGGCTGAGTTCCTGGAG 945 Query 15246 ATCTATGGCCTGCCGATCCGGCTGGGGAAATA 15277 ||||| || |||||| | || ||||| | ||| Sbjct 946 ATCTACGGGCTGCCGCTGCGTCTGGGCACATA 977 >seq142977 Length=495 Score = 91.5 bits (100), Expect = 3e-14 Identities = 288/436 (66%), Gaps = 19/436 (4%) Strand=Plus/Minus Query 14663 GCACCCGGCCAAGGGGCTGACGCCGGCCAAGCTGGCTCGCATCCTGGTCGAGGCCGAACA 14722 |||||| || ||| || ||||| |||||||||| | ||||||| || |||||| || Sbjct 454 GCACCCAACCCGGGGCCTCACGCCTTCCAAGCTGGCCCAGATCCTGGACGCGGCCGAGCA 395 Query 14723 GGGCAACCTCCAAGCCCAGGCCGAATTGTTCATGGACATGGAGGAACGCGACGCCCACCT 14782 || ||||| |||||| ||| ||||| ||||||||||||| |||| ||| | Sbjct 394 AGGAGACCTCACGGCCCAGTTCGACCTGTTCGAGGACATGGAGGAAAAGGACGGCCATAT 335 Query 14783 GTTCGCCGAAATGAGCAAGCGAAAGCGCGCAATCCTTGGCCTGGATTGGGCGGTCGAGCC 14842 | |||| ||| ||||||| ||||| ||| |||||| |||| | || ||| Sbjct 334 CGCCTCCGAGATGGGCAAGCGGCGCCGCGC---CCTGATCCTGGACTGGGAGATCACGCC 278 Query 14843 CCCGCGTAACGCCTCGGCGGCC-GAGAAAGC-CGATGCCGACTACTTGCACGAGCTATTG 14900 || ||||| | || || | ||||| | ||||||| | ||| |||||| || Sbjct 277 GCCCGAAAACGC--CAGCACCCTGGAAAAGCGCAATGCCGAGCAGTTGGGCGAGCTGGTG 220 Query 14901 CTCGACCTGGAAGGGCTGGAGGACTTGCTGCTCGATGCGCTGGACGGCATCGGCCACGGC 14960 | | | | | || ||||| || | |||| || ||||| ||||||| | ||| Sbjct 219 CAGGCCATACCGGACCTAGAGGATGTGATCTTCGACGCCACGGACGCCATCGGCAAAGGC 160 Query 14961 TACAGCTGCA----TTGAGCTGGAGTGGGCGCTACAGGGGCGCG-AGTGGATGCCGCTGG 15015 | |||| |||| | || | ||| | | |||| | | ||| |||| | | Sbjct 159 T----TTGCAAACCTTGAAATCGAAT-GGCACCGCGAGGGCAAGTACTGGGTGCC-CAAG 106 Query 15016 CGTTCCAC-CACCGACCGCAGAGCTGGTTCCAGCTCAACCCCGAAGACCAGAACGAGCTG 15074 | ||| ||||| |||||| |||||| ||||| ||| || | || | || ||| Sbjct 105 AGCATCACGCACCGGCCGCAGTCCTGGTTTCAGCTGCACCGCGGATTCCGCCAGGAACTG 46 Query 15075 CGGCTGCGCGACAACA 15090 || |||||| ||||| Sbjct 45 CGCCTGCGCACCAACA 30 >seq139399 Length=451 Score = 82.4 bits (90), Expect = 2e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 20302 CGCATCCCGACGAACTGGTCTTCGCCCTGCTCAAGGCCGGCAACGCCAATCTCTGCTACG 20361 |||| |||||||| || |||||||| || || |||| ||| ||||| | |||| || Sbjct 3 CGCACCCCGACGAGCTCGTCTTCGCGCTCCTGCAGGCGGGCTTCGCCACGCGGTGCTTCG 62 Query 20362 ACGGTCAAAACTTCTTCGACACCGATCACCCGGTC 20396 |||| || ||||||||||||| |||||||| ||| Sbjct 63 ACGGCCAGTACTTCTTCGACACGGATCACCCTGTC 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116769606531012