Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq23847 183 8e-42 >seq23847 Length=8263 Score = 183 bits (202), Expect = 8e-42 Identities = 356/515 (69%), Gaps = 13/515 (3%) Strand=Plus/Minus Query 30782 GTCAATTTGTCGAGCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCGGCGAAC 30841 |||||||| || |||||||| || || || |||| | || |||||||| || |||| Sbjct 7367 GTCAATTTTTCTCGCATGTTCGGTTAGATGGGTTGGGGATAGGTGAGCATAGCGCTGAAC 7308 Query 30842 CATTTCGATAGACTCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTG 30901 |||||| || |||||| || |||||||| |||| | |||||| || ||||| ||||| Sbjct 7307 CATTTCTATGCTCTCCCATCCGCCCATTTCTTGCAGTGCCGAAAGTGGCACGCCTGCCTG 7248 Query 30902 AACTAACCAACTTGCCCACGTGTGCCTCAGGTCATGAAAACGGAAGTCTTCAATGCCCGC 30961 ||| |||||||| |||||||| |||| ||| || ||||| ||||| || || ||||| Sbjct 7247 AACCAACCAACTCGCCCACGTATGCCGCAGATCGTGAAAGCGGAAATCAGTTATTCCCGC 7188 Query 30962 --TCGTTTTAATGCTGCCCTCCATGCAGTATTAGCGTCATAGCGCATCTTCCTCACTACA 31019 || ||| | || |||| || | ||| | ||| ||||| ||||| ||| | Sbjct 7187 CCTCCGTTTCCCGGTGT--TCCAAGCTGAGTTATCATCAACCCGCATTTTCCTAACTGCC 7130 Query 31020 G--GTGATTTAGTTCCGTCTGGTTTGGTGC-TGCTTTCCTTGTAGACGAACACCCATTTG 31076 | || | | | ||| | ||| | | |||| || | | || || || | | Sbjct 7129 GCGGTCACTCCG--CCGCCAGGTCGTTTCCGTGCTGTCGTA-TGCACAAAGACGTACC-G 7074 Query 31077 TGA-TGATTGCCGATTTGCTTTTTCAGCACCCGGCAAGCGGTATCATTCAGCGCCACTCC 31135 ||| || || || || || | || ||||| |||||||| ||||| || || || Sbjct 7073 TGAGTGCTTCCCAATCTGATCACGCAATGTTCGGCACGCGGTATCGTTCAGAGCAACGCC 7014 Query 31136 AATGGCATGATTAGACTTGCTTTGTTCCGGGTGTATCCATGCCACCTTTCGTTGCATGTC 31195 ||| || | | | ||| | || ||||| |||||||||||||||| ||||||||| Sbjct 7013 AATAGCCTTACCCGCTTTGGCGTTCTCTGGGTGGATCCATGCCACCTTTCTTTGCATGTC 6954 Query 31196 TATCTGCTGCCACTCCAGATTGATAATGTTAGACCGCCTTAAGCCAGTAGAAAGCGCAAA 31255 | |||| |||||| |||| ||| || || || || | || |||||| | || ||||| Sbjct 6953 AACCTGCGACCACTCGAGATCGATGATATTTGAACGGCGTAGGCCAGTTGCCAGGGCAAA 6894 Query 31256 CTCTACGACTGACTTTAGCGGTTCCTGGCATTCAT 31290 | || || | | | | | ||||| ||||| ||| Sbjct 6893 AACGACAACGGGCCTAAACTGTTCC-GGCATGCAT 6860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133300080194772