Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2002 111 2e-19 seq1 89.7 7e-13 >seq2002 Length=109662234 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||||||||| || | ||||||||||| ||||| || ||||||| || | ||| || Sbjct 93266411 TCATCTCTACTGATGAGCTCGTTAGAAAAAGTGAGTCCAGGCATTAAGCCTCTTTTCTTC 93266352 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 |||||||| |||| || ||||| ||||||||||| || ||||| || || |||||||| Sbjct 93266351 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAATGC 93266293 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||| |||||||| | ||||||||||| || || ||||| || ||||| || |||||| Sbjct 93267686 GACATGACTCCCATCCTCTGATATTCACCTACTCGCTTCTCAAAGAAATTGGTCTTGCCT 93267627 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 |||| || || || ||||| |||||||| ||||| Sbjct 93267626 TCCAGAGAGATGTTCTCCATGAAATCAAAAGGATT 93267592 Score = 86.0 bits (94), Expect = 9e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 |||||||| ||| || || || | |||||| |||||||| || || |||||||| || || Sbjct 93264766 ATCTTTAATGTACGTGTCAATGAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGC 93264707 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 ||||| || || || ||||| | ||||||||||| || || || Sbjct 93264706 AATCTGGAAGCCATAGAAACAACGAGCTTCTGTGATTTGCACTTC 93264662 >seq1 Length=190651702 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 || || ||||| || | ||||| || ||||| || |||||||| || || || | ||| Sbjct 189189485 TGGAACTCTCCTGAAAGGACTCTGCGTGTGTAGATGTTACTGGTGTAGGGCTCAATGGAT 189189544 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 || ||||| |||| || |||||||| |||||||||||||| || | | | | || Sbjct 189189545 TCGTTGTTGCCCAGGATCTGAGCAGTGGAAGCAGTTGGCATGGGAGAAAGGAGAAGGCTG 189189604 Query 77247 TTTCTGAGACCATG 77260 ||||||| |||||| Sbjct 189189605 TTTCTGACACCATG 189189618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692660460399040