Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_031059.1 Length=38773 Score E Sequences producing significant alignments: (Bits) Value seq139399 116 9e-22 seq156407 80.6 7e-11 >seq139399 Length=451 Score = 116 bits (128), Expect = 9e-22 Identities = 199/284 (70%), Gaps = 11/284 (4%) Strand=Plus/Plus Query 21419 CGATGGCCAGTTCTTTTTCGACACCGATCACCCGGTGGTGGATGCG---AATGGCGTCGA 21475 ||| ||||||| ||| |||||||| |||||||| || | | | || | ||| | Sbjct 61 CGACGGCCAGTACTTCTTCGACACGGATCACCCTGTCGGACAGCCCGGTAAGGAAGTC-A 119 Query 21476 GCAGTCGGTGTCGAACTTCCAGGGGGGCACCGGCGCCGCCTGGTACCTGATCGACGACAC 21535 || ||| |||||||| || ||||| ||||| ||||||| |||| | ||| || Sbjct 120 GC-----GTGAGCAACTTCCAAGGCGGCACGGGCGCAGCCTGGTTCCTGGTGGACACGAC 174 Query 21536 GCGCGTGATCAAGCCGATGATCTTCCAGGACCGGCAGCCGG-CGACGATCACTCCGAAGA 21594 |||||||||||||| |||| |||| || | || || | || || | || Sbjct 175 CAAAGTGATCAAGCCGATCATCTACCAGCGTCGCCGCCCCTACGCCTTCCAGGCC-AGGA 233 Query 21595 CCAGCCTGACCGACGACAATGTCTTCCACCGCGACGAGTTCCTGTGGGGCGCCAAGCGCC 21654 | ||||||||||||||||| |||||| ||||| |||||||| | ||||| || | ||| Sbjct 234 CGAGCCTGACCGACGACAACGTCTTCAACCGCAACGAGTTCGTCTGGGGTGCAGATGGCC 293 Query 21655 GCTGCGCCGCGGGCTTCGGCGCCTGGCAGCTGATCTATGCCTCC 21698 || || || |||| ||| ||||| ||| |||||| ||| Sbjct 294 GCAGCAACGTCGGCTATGGCCTGTGGCAACTGGCCTATGCGTCC 337 >seq156407 Length=471 Score = 80.6 bits (88), Expect = 7e-11 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 18184 TGGTGGGGCAAATCGC-TGATGGAGGATCCGCAGACAGGCGAGATGGTCGAGGTGCAGCT 18242 ||||||||| || ||| ||||| |||||| || ||||||| |||| | | |||||| Sbjct 439 TGGTGGGGC-AAGCGCGAGATGGTCGATCCGGTCACCGGCGAGACGGTCAATGCGCAGCT 381 Query 18243 CGGCTCGCCCCGCC-GGCTGCGCACGATCTACGACACCAATATGCGCACCGCCCATGCCG 18301 |||| || ||| ||||||||| |||| |||||||| | |||||| || ||| Sbjct 380 CGGC-AGCGATGCCAGGCTGCGCAAAATCTTTGACACCAACGTTTCCACCGCGTATTCCG 322 Query 18302 CGGGGCACTGGGCGCGCATCCAGCGCACGAAACAGGCCTTCCCCTATCTGCACTA 18356 |||||| | | ||| |||||||||| | || || ||||| ||||| || Sbjct 321 AGGGGCAGTCCGAGCGGATCCAGCGCAACATCGAGCTGTTTCCCTACCTGCAGTA 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123611563198020