Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_031111.1 Length=53623 Score E Sequences producing significant alignments: (Bits) Value seq44507 80.6 9e-11 >seq44507 Length=921 Score = 80.6 bits (88), Expect = 9e-11 Identities = 154/226 (68%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 41692 CGTAGAGCCAGGCGATGGAGTCACGAATCTCGAAGCCCGCGTCCTCGATGGCCACGGTCA 41751 ||||||| | |||| |||||| || || |||||||| ||||| || | | | || Sbjct 462 CGTAGAGAAATACGATCATGTCACGTATTTCAAAGCCCGCATCCTCAATACGCGCTGCCA 403 Query 41752 GCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACCC 41811 |||||| || ||||| || ||||| || || || |||||||||||||| || | Sbjct 402 TCCGGTGTTGAGTTCGGGATCCCGAGAAGGACAGTAGATGACCACCGGGCTTGAGTACGC 343 Query 41812 GCAGGCATTGCTCCCACATCTCGACATCGAAGGCGATACCCGAGCCGTCCCACTTCTTGC 41871 |||| |||| ||||| || | | | ||| | | | | |||||| |||| | Sbjct 342 GCAGACATTCTTCCCAGAT---GGCTTGTGAGGGAACATCTTA---GTCCCATGTCTTAC 289 Query 41872 CCATGAATCCCAGTTCGTAGGGTGGGTCGGTGACGATGGAGTCGAC 41917 |||||||| | | || || |||||||| |||||| ||| || Sbjct 288 CCATGAATTTAATACCATAAGGCGGGTCGGTCACGATGCTGTCCAC 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171001048508220