Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq32204 96.9 4e-15 seq145388 82.4 9e-11 seq44435 82.4 9e-11 >seq32204 Length=920 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 ||||||| |||||||||| ||||||||| ||||||||||| || ||||||||||||| Sbjct 565 ATTCCTCAATAGCTCAGTTGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGA 506 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||| ||||||| Sbjct 505 GCCCAGGTTGAGGAGC 490 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 ||||||| |||||||||| ||||||||| ||||||||||| || ||||||||||||| Sbjct 694 ATTCCTCAATAGCTCAGTTGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGA 635 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||| ||||||| Sbjct 634 GCCCAGGTTGAGGAGC 619 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||||| |||||||||| ||||||||| ||||||||||| || |||||||||||||| Sbjct 814 TTCCTCAATAGCTCAGTTGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGAG 755 Query 19808 CCCAGGTGGAGGAGC 19822 ||||||| ||||||| Sbjct 754 CCCAGGTTGAGGAGC 740 >seq145388 Length=341 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||| Sbjct 232 TTCCCCGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCGCTGGTTCGAG 291 Query 19808 CCCAGGTGGAGGAGC 19822 ||||| | | ||||| Sbjct 292 CCCAGCTCGGGGAGC 306 >seq44435 Length=690 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19748 TTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGAG 19807 |||| | ||||||||||||||||||||| ||||||||||| | ||| |||||||||| Sbjct 361 TTCCCCGATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCGCTGGTTCGAG 302 Query 19808 CCCAGGTGGAGGAGC 19822 ||||| | | ||||| Sbjct 301 CCCAGCTCGGGGAGC 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620271947818320