Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq214845 205 1e-47 seq213899 172 6e-38 seq2976 95.1 1e-14 >seq214845 Length=205 Score = 205 bits (226), Expect = 1e-47 Identities = 161/192 (84%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||| || | |||||||||||||||| ||||||| ||||||||||||||| Sbjct 190 TCTCGCTCTGTCACCAAAGCTGGAGTGCAGTGGCGCGATCTCC--TCACTGCAACCTCCG 133 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 |||||| ||||||||| ||||| |||||||| |||| |||||||||||| |||||| Sbjct 132 CCTCCCTGGTTCAAGCGATTCTTCTGCCTCACCCTCTCGAGTAGCTGGGACTACAGGTGT 73 Query 8464 AAGCCACCACGCCAAGCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGG 8523 ||| || ||| || |||||||| ||||||| ||||||| ||||| || ||||||||| Sbjct 72 GCACCAACATGCCCAGATAATTTTTATATTTTTGGTAGAGACAGGGTCTCGCCATGTTGG 13 Query 8524 CCAGGCTGGTCT 8535 |||||||||||| Sbjct 12 CCAGGCTGGTCT 1 >seq213899 Length=506 Score = 172 bits (190), Expect = 6e-38 Identities = 191/250 (76%), Gaps = 16/250 (6%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||||| |||||| |||| ||||||| | || || |||||||||||| Sbjct 191 TCTCACTCTGTCACCCAGGTTGGAAGGCAGTGGTGTCATA---GCACACTGCAACCTCAA 247 Query 8404 CCTCCC--GGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGC 8461 | ||| | | |||||| || |||| ||||||||||| |||||||||||| ||||| Sbjct 248 C-TCCGATGAGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGATCCCAGGC 306 Query 8462 AAAAGCCACCACGCCAAGCTAATTTT---TGTATTTTTAGTAGAGAGAGGGTTTCACCAT 8518 | | ||| || ||||||||| | ||||||| |||||| ||||| |||| || Sbjct 307 ACA------CACCCCTGGCTAATTTTGTTTTTATTTTT-GTAGAGGCAGGGTCTCACTAT 359 Query 8519 GTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAA 8578 |||| |||||||| |||| |||||||| |||| | |||| |||||| |||||| |||| Sbjct 360 GTTGCCCAGGCTGATCTCAAACTCCTGGGCTCAAGCAATCCTCCTGCCACGGCCTTCCAA 419 Query 8579 AGTGCTGGGA 8588 |||||||||| Sbjct 420 AGTGCTGGGA 429 >seq2976 Length=93210757 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || || || | |||||| || || || ||||| ||||| | || | || || Sbjct 73918723 TCATCTCTGCTGATAAGTTCATTGGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCTTC 73918782 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||| ||||||||||| || |||||||| || || ||||| || |||||||| Sbjct 73918783 AGCCAAAATATAGCAGCAAATGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 73918842 Query 23653 AC 23654 || Sbjct 73918843 AC 73918844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519980339080400