Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq8367 152 4e-32 seq7705 145 5e-30 seq142870 132 3e-26 >seq8367 Length=9740059 Score = 152 bits (168), Expect = 4e-32 Identities = 173/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || ||||||||| || ||| |||||| ||||||||||| || Sbjct 8893220 CATGCCACCTCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 8893161 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| |||| ||||||||||| || |||||||||| | ||||||||| | Sbjct 8893160 AGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 8893101 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| || || || ||||| || | |||||||| || || Sbjct 8893100 AGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTC 8893041 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 8893040 AACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 8892989 Score = 149 bits (164), Expect = 4e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | |||||||||||| || ||| ||| || ||||||||||| || Sbjct 8893448 CATGCCTCCCCTCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 8893389 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| |||| ||||||||||| || |||||||||| | ||||||||| | Sbjct 8893388 AGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 8893329 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| || ||||| ||||| || | || ||||| || ||| Sbjct 8893328 AGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTC 8893269 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 8893268 AACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATG 8893217 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||||||||| || ||| |||||| ||||||||||| || Sbjct 8892992 CATGCCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 8892933 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || || ||||||| | ||||||||| | Sbjct 8892932 AGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGG 8892873 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| || || || ||||| || | |||||||| || || Sbjct 8892872 AGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTC 8892813 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 8892812 AACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 8892761 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||| || | || ||||||||| || ||| || || ||||||||||| || | Sbjct 8893672 CCACCTCTGAGGCGCAGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 8893613 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| |||| ||||||||||| || |||||||||| | ||||||||| | ||| Sbjct 8893612 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGA 8893553 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||| || || ||||| ||||| | | |||||||| || || ||| Sbjct 8893552 ATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACC 8893493 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || | || || ||||| || || ||||| ||||| ||||| |||||| Sbjct 8893492 TCAAGAGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 8893445 >seq7705 Length=13065498 Score = 145 bits (160), Expect = 5e-30 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||||||||| || ||| |||||| ||||||||||| || Sbjct 4578422 CATCCCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 4578363 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || ||||||||||| || |||||||||| | ||||||||| | Sbjct 4578362 AGACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 4578303 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||| | | | ||||| || || ||| Sbjct 4578302 GGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGTTC 4578243 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 |||||||| || || ||||| || || | ||||||||||||||| |||||| || Sbjct 4578242 CACCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATGTTG 4578188 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || || || || || ||| |||||| ||||||||||| || | Sbjct 4578874 CCACCCCTCAGGCGCAGGACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4578815 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || ||||||||||| || |||||||||| | ||||||||| | || Sbjct 4578814 AGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 4578755 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| ||||| |||| | |||| | |||||||| || ||| || Sbjct 4578754 ATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCAATGGTGTCACTGGGTTCAAC 4578696 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||| || ||||| || || | ||||||||| ||||| ||||| Sbjct 4578695 CTCCAACGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4578648 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || ||||||||| || ||| |||||| ||||||||||| || Sbjct 4578650 CATCCCTCCCCTCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 4578591 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || ||||||||||| || |||||||||| | |||||||| | Sbjct 4578590 AGACAGAGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGG 4578531 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||| | | | |||||||| | || Sbjct 4578530 GGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTCTCAATGGTGTCACTAGGCTC 4578471 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||| || || ||||| ||||| | ||||||||| ||||| ||||| Sbjct 4578470 GACCTCCAGAGTGATGGTCTTACCCGTCAAGGTCTTCACAAAGATCTGCAT 4578420 >seq142870 Length=314 Score = 132 bits (146), Expect = 3e-26 Identities = 211/300 (70%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 6622 GCCATAAGCTGACCGAAATTACCCTTGTACATTTCCGAGTAGGCCTCGACGCCCTTCTGG 6681 ||||| ||||| ||||| || |||||||| || |||| ||||||||||| Sbjct 7 GCCATCAGCTGGCCGAAGTTGCCCTTGTAGGGGTCATCCCAGGCGGTCACGCCCTTCTGC 66 Query 6682 GGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCTTGAAGTCGTCTCGTCCCTCG 6741 | |||||| || ||| | | |||||| || || || |||||||| || || |||| Sbjct 67 GCTTTTTGCAGCGCGGCGAACGGATCGTGGATCGAGACTTTGAAGTCCTCGCGGCCCTGA 126 Query 6742 CACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTTTCAGAGCGTCGTTGATACCA 6801 || || ||||||| || | ||| ||| | || |||||| ||||||||| ||| Sbjct 127 CAGGAGCGCTGCAAGGCCTGGAAACTGCCTTCGATCTCTTTCAGGCTGTCGTTGATGCCA 186 Query 6802 TCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGTGTGAGATTGGGAATGGGGATT 6861 | || ||||| || || | || ||||||||||| || || || || | ||||| Sbjct 187 TTGCCGCCGCAGATCGGGATAAAGCCGTACAGCAGGTGGGTCAGGTTTTGCGCCGGGATC 246 Query 6862 CTGTCGGCGG-GAAACTGTCTGTCGTAAACACCCCACTCCACGAAGTAAGCTCCGATGAC 6920 ||||| ||| |||| || | ||||||| |||||||| ||||| |||| |||| ||| Sbjct 247 TTGTCGACGGTGAAATTG-CGCCCGTAAACGCCCCACTCGACGAAATAAGAACCGACGAC 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358975659735462