Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq8367 132 4e-26 seq7705 132 4e-26 >seq8367 Length=9740059 Score = 132 bits (146), Expect = 4e-26 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| ||||| ||| ||||||||| ||||| ||||| || ||||||||| Sbjct 8893207 AGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 8893148 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||||||||| || || ||||| | ||| || || | |||| || ||| Sbjct 8893147 CCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCC 8893088 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 ||||| |||||| |||| ||| | | ||||| || | ||| ||||| | || Sbjct 8893087 TTGTCTTGGATTTTGGCCTTC-ACGTTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGT 8893029 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || ||||| ||||| || || ||||||||| Sbjct 8893028 GATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 8892989 Score = 129 bits (142), Expect = 5e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| ||||| ||| ||||||||| ||||| ||||| || |||||||| Sbjct 8892979 AGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGT 8892920 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| ||||| ||||| | ||| || || | |||| || ||| Sbjct 8892919 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCC 8892860 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 ||||| |||||| ||||| | ||||| || | ||| ||||| | || Sbjct 8892859 TTGTCTTGGATTTTGGCCTTCACATTTTCAATGGTGTCACTGGGCTCAACCTCGAGGGTG 8892800 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || ||||| ||||| || || ||||||||||| Sbjct 8892799 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 8892759 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || |||||||| ||||| ||| ||| ||||| ||||| ||||| || |||||||| Sbjct 8893435 AGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGT 8893376 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||||||||| || || ||||| | ||| || || | |||| || ||| Sbjct 8893375 CCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCC 8893316 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 ||||| ||| || ||||| | |||||| || | || ||||| | || Sbjct 8893315 TTGTCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCACTGGGTTCAACCTCAAGGGTG 8893256 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || ||||| || || ||||||||| Sbjct 8893255 ATGGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCATG 8893217 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| ||||| ||| || ||||| ||||| ||||| || ||||||||| Sbjct 8893663 AGGCGCAGCACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 8893604 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||||||||| || || ||||| | ||| || || | |||| || || Sbjct 8893603 CCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGAGGAATGCCTTCT 8893544 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 ||||| ||| || ||||| | | ||||| || | ||| ||||| | || Sbjct 8893543 TTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGAGTG 8893484 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || || || || || || || ||||||||| Sbjct 8893483 ATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCATG 8893445 >seq7705 Length=13065498 Score = 132 bits (146), Expect = 4e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| ||||| ||| ||||||||| ||||| ||||| || || |||||| Sbjct 4578409 AGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGC 4578350 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | ||| || || | ||||| || |||| Sbjct 4578349 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCC 4578290 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 |||||| ||| || ||| | | | || || || | |||||||||| || Sbjct 4578289 TTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTATCACTGGGTTCCACCTCCAAGGTG 4578230 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || |||| ||||| ||||| ||||||||||| Sbjct 4578229 ATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATGTT 4578189 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| ||||| ||| ||||||||| ||||| ||||| || || |||||| Sbjct 4578637 AGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGC 4578578 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| || || ||||| | || || || | ||||| || |||| Sbjct 4578577 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGGGGAATGCCCTCC 4578518 Query 41765 TTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| ||| | || | ||| | | | ||||| || | ||| ||||||| || Sbjct 4578517 TTGTCC-TGAATCTTGGCCTTGACATTCTCAATGGTGTCACTAGGCTCGACCTCCAGAGT 4578459 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||||||||| ||||| || || |||||||| Sbjct 4578458 GATGGTCTTACCCGTCAAGGTCTTCACAAAGATCTGCAT 4578420 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || ||| ||||||||| ||||| ||||| || || |||||| | || || Sbjct 4578856 ACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGCCCATCTTCC 4578797 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || ||||| | ||| || || | ||||| || |||||||||| | Sbjct 4578796 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 4578737 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||||| | | ||||| || | || ||||||| ||| || || || Sbjct 4578736 ATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGTTCAACCTCCAACGTGATGGTCTTG 4578677 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| || || |||||||| Sbjct 4578676 CCAGTCAAGGTCTTCACAAAGATCTGCAT 4578648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460967444463200