Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq25144 138 1e-27 seq7805 98.7 1e-15 >seq25144 Length=5395991 Score = 138 bits (152), Expect = 1e-27 Identities = 181/251 (72%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| | |||||||||||||||||| |||||| ||| ||| Sbjct 1960747 GAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCACACTGGGGACCAGATGATGTACTG 1960688 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||| | ||| || | | ||| || || || || |||||| ||||| Sbjct 1960687 CGGGTTGGTCATCAGGGAGGAGGGGTCATCATGCGGGAAGGGTAGCGCCTCTTTCAGGAA 1960628 Query 83263 GGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322 || |||||| || || || | ||||||||||||||||||||||| | || ||||| Sbjct 1960627 GGTGAAGAGGGGGTGCGCGTTCTTCCCGTTGACCTCGCACTTCTCGAACATGATGAAGTT 1960568 Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG 83382 |||| | | || ||||| |||||||| |||| || || || |||||| | ||| Sbjct 1960567 GGGCTTGTACCCCTTCCCGGGACGGACATGCTCTAGCGACAACAGGATCTCCTCGTTCGT 1960508 Query 83383 GGCGTTTTCCT 83393 || ||||||| Sbjct 1960507 CGCATTTTCCT 1960497 >seq7805 Length=1302 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/152 (75%), Gaps = 5/152 (3%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCG-AGCTCCTAGG 83449 ||||| ||||||||||| || ||||| || ||||| ||||||| ||| | | | || Sbjct 1018 CCTGGAAGCCGAACTGGTTGCAGGGGAAGCCCAGCACCACCAGCCGCCGCGGGTACCGGG 959 Query 83450 CGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCT 83509 | |||||||| ||| | ||| ||||| |||| |||||| |||||||| || || Sbjct 958 C----CTGCAGCTGGTTGAGCTGGGTGTAATCCCTCACCGTGGAGCCTCAGAGCGATGCC 903 Query 83510 ACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541 |||||||| ||||| | || |||||||| || Sbjct 902 ACGTTCTCAATGAGGACCACACGGCCCCGGAA 871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608604937688480