Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq25194 95.1 8e-15 >seq25194 Length=36020201 Score = 95.1 bits (104), Expect = 8e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| |||| | || |||||||| ||||| || |||||||| ||| Sbjct 29880889 GTGACATGGGCAATCATGTAAGTAAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 29880948 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || || || | || || || | | |||||| ||||| Sbjct 29880949 AGTCCCATATCTCCAGACCTCTGGTAGAGTTGGCATGATAATTCACCATCAAGAACATAG 29881008 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | |||| || || ||||| ||||| Sbjct 29881009 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 29881043 Score = 93.3 bits (102), Expect = 3e-14 Identities = 128/176 (73%), Gaps = 10/176 (6%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| || || |||||||| ||||| | ||||| || ||| Sbjct 29884431 TATTCTGCTCCAAAGTGCCTCCACTGAAAACCATAAACTGGTCCCAAATCTCCCTCCTCT 29884490 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || || ||||| |||||||| || Sbjct 29884491 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGCGAACCATTAGCATCCCAGAT 29884546 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACA 97573 | |||||| ||| | ||||||||| | ||||| || || ||||| |||| Sbjct 29884547 CTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC-CT-ATAAAACACA 29884600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346677443246840