Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_002641.1 Length=159160 Score E Sequences producing significant alignments: (Bits) Value seq25145 131 2e-25 >seq25145 Length=5232295 Score = 131 bits (144), Expect = 2e-25 Identities = 154/210 (73%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 125306 GCAGCGCCGACAACGCTGCCTGCGTGCCGCCGCTCGCTAACGGCGCGCAGGAGCGAAAGA 125365 ||||||||| | || |||||| || | | ||| | ||||||||||||||| |||| Sbjct 1495855 GCAGCGCCGTC---GCCTCCTGCGGCTCGGCCCGCGCCAGCGGCGCGCAGGAGCGGAAGA 1495911 Query 125366 AGGGCCTCTCTCGCCGCTCCAGCTCGGCCGCCGCTCGCCGNNNNNNNNNNNNNGTAGGAC 125425 || || ||| |||| ||||||||||||||||| ||||| || || | Sbjct 1495912 AGACCCGCTCCTGCCGTTCCAGCTCGGCCGCCGCCCGCCGCAGTGTGGCCGCCGTGGGGC 1495971 Query 125426 TCGGCGGCGGCCC--TTCCTTGCCGCAGCAGTGCTGGAAGTAATCCTCCAGCAGCAACGC 125483 | || ||| || | | || ||||| || |||||||||||||||||||||||||| ||| Sbjct 1495972 TGGGGGGCAGCGCGCTGCC--GCCGCTGCGGTGCTGGAAGTAATCCTCCAGCAGCAGCGC 1496029 Query 125484 CGTTTCTTCCTTCAGGGAGTCAGCCATGGC 125513 ||| || |||||||| || | | |||||| Sbjct 1496030 CGTCTCCTCCTTCAGCGATCCCGGCATGGC 1496059 Score = 113 bits (124), Expect = 5e-20 Identities = 150/210 (71%), Gaps = 7/210 (3%) Strand=Plus/Minus Query 157083 GCCATGGCTGACTCCCTGAAGGAAGAAACGGCGTTGCTGCTGGAGGATTACTTCCAGCAC 157142 |||||| | | || |||||||| || |||||| |||||||||||||||||||||||||| Sbjct 1496059 GCCATGCCGGGATCGCTGAAGGAGGAGACGGCGCTGCTGCTGGAGGATTACTTCCAGCAC 1496000 Query 157143 TGCTGCGGCAAGGAA--GGGCCGCCGCCGAGTCCTACGGCGGCAGAGCTGCGGCGAGCNN 157200 || ||||| || | | || ||| || || || |||||||| |||||||| || Sbjct 1495999 CGCAGCGGC--GGCAGCGCGCTGCCCCCCAGCCCCACGGCGGCCACACTGCGGCGGGCGG 1495942 Query 157201 NNNNNNNNNNNGAGCGGCGAGAGAGGCCCTTCTTTCGCTCCTGCGCGCCGTTAGCGAGCG 157260 || |||| ||| || |||||| ||||||||||||||| | ||| | | Sbjct 1495941 CGGCCGAGCTGGAACGGCAGGAGCGGGTCTTCTTCCGCTCCTGCGCGCCGCTGGCGCGGG 1495882 Query 157261 GCGGCACGCAGGCAGCGTTGTCGGCGCTGC 157290 || |||||| || | ||||||||| Sbjct 1495881 CCGAGCCGCAGGAGGC---GACGGCGCTGC 1495855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509023530662400