Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq25143 363 1e-95 seq25211 86.0 4e-12 >seq25143 Length=5469902 Score = 363 bits (402), Expect = 1e-95 Identities = 685/1002 (68%), Gaps = 14/1002 (1%) Strand=Plus/Plus Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGC-TTCAAGGCCCAAAGGAAGTTCATACAGTT 107686 ||||| ||||| ||| ||||| || || ||||||| || |||||| |||| Sbjct 1486388 TACCTGAACATGGCCAAGGACTGC-AGTGCCTTCAAGGAGAGCCGGCGGTTCATCGAGTT 1486446 Query 107687 CCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAA 107746 ||| ||||| |||||||| ||| ||||||||||||||||| ||||| ||||||| || Sbjct 1486447 CCCGCTGAGCCAAGAAGAGGAAGAGTTCCCCATTGCCTACTCCATGGTCATCCATGACAA 1486506 Query 107747 GATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGT 107806 || || | || || |||| ||||| || | |||||||| |||||| | ||||| || Sbjct 1486507 AATCGAGATGTTCGAGAGGCTCCTGCGGTCCCTCTATGCCCCCCAGAACGTCTACTGCGT 1486566 Query 107807 CCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTG 107866 |||| | || |||||| ||| | ||| | || || || | |||||| | || Sbjct 1486567 CCACATTGACAACAAGTCCTCAGCCGCCTTCCAGGAAGCCGTGAGGGCCATCGCAGCTTG 1486626 Query 107867 CTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAG 107926 |||||||||||| ||| |||| || ||| ||||| ||||||||||||||| | Sbjct 1486627 CTTCCCCAATGTGTTCGTGGCGAGCCGCCTGGAAGACGTGGTCTATGCCTCCTGGTCCCG 1486686 Query 107927 AGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTA 107986 |||| || ||||| ||||| ||| | ||| || | |||||| | |||| ||| | || Sbjct 1486687 GCTGCAGGCCGACCTCAACTGCATGCAGGACCTGTTGCAGAGCCCCATGCCCTGGCACTA 1486746 Query 107987 CTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGC 108046 | || || || ||||| || || |||||||| ||||| |||||||| || |||| || Sbjct 1486747 TGTCCTCAACACCTGCGGCACTGATTTCCCCATCAAGACTAATGCCGAAATAGTCCGTGC 1486806 Query 108047 CCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaa 108106 ||| ||| || || |||| |||||| |||||||| ||| || || | | ||| Sbjct 1486807 CCTGAAGTTGCTGCAGGGGCGGAACAGCATGGAGTCGGAGAAGCCGTCGGCGCTCAAGCG 1486866 Query 108107 aaaTCGCTGGAAATACCGCTATGAGGT---GACAGACACACTGTACCCTACCAGCAAGAT 108163 | |||||| | |||| | ||||||| || | || | | || || || | Sbjct 1486867 GGAGCGCTGGCAGTACCACCATGAGGTGGGGAAGGTCA---TCTCCCGGACAGCCACCAA 1486923 Query 108164 GAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTC 108223 ||| || || || | || | | |||||||| || || || || | |||| | | Sbjct 1486924 GAAACTGCCGCCGCCCCACAACTACCATATGTTCACGGGCAACGCGTACGTCGTGGTCAC 1486983 Query 108224 TCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGT 108283 || ||||| || || || |||| || ||| | | || | | || |||| Sbjct 1486984 CCGCGCCTTCGTGCAGCACATCTTCGAGGACCACGCAGCGCAGCAGTTCCTCGAGTGGGC 1487043 Query 108284 CAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGAT 108343 ||| |||||||| ||||| ||||| ||| |||||||||| || | |||| || | | Sbjct 1487044 CAAGGACACCTACAGCCCTGACGAGCACGTCTGGGCCACGCTCAACCGTGTGCCCGGTGT 1487103 Query 108344 GCCTGGCTCTGTTC---CTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGC 108400 ||| ||| | | | | || | ||||| ||| |||| ||||||| || | | Sbjct 1487104 GCCCGGCGCCATGCCCTCGAGTGA---CAAGTTCCACCTCTCGGACATGAACTCCCTGCC 1487160 Query 108401 CAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACC 108460 | | || ||||||||| |||||| ||||| || ||||| ||| ||||| || | || Sbjct 1487161 CCGCCTGGTCAAGTGGGAGTACCTGGAGGGGGACACCAGCAAGGGCGCGCCCTACCCGCC 1487220 Query 108461 CTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGAT 108520 |||| | || || | | | | |||| || ||||||| || ||| || |||||| Sbjct 1487221 CTGCACCGGCCGGCACCAGCGCTCAGTCTGTATCTACGGGGTGGGCGACGTGCCCTGGAT 1487280 Query 108521 TCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCT 108580 |||||| | || ||||||||||| |||||||| ||||| |||||| || || | Sbjct 1487281 GCTCCAGCAGCACCACCTCTTGGCCAACAAGTTCGACCCCTTGGTGGACGACGCCGCTAT 1487340 Query 108581 GCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGG 108622 || || | || ||| |||| || || | ||| |||| || Sbjct 1487341 CCAATGTCTGGAGGAGCACCTGCGCCACAGGGCTCTCTACGG 1487382 >seq25211 Length=34478284 Score = 86.0 bits (94), Expect = 4e-12 Identities = 227/343 (66%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || || || ||||| ||| || || || || ||||| || ||||| || | || Sbjct 21606072 CCTCTCAGCAATGAAGAAGCAGAATTTCCAATAGCTTACTCAATAGTGGTGTATCACAAA 21606013 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||| | |||| | || || || | | |||||||||||||| | ||||| | Sbjct 21606012 ATTGAGATGCTTGACAGACTTCTAAGATCAATCTATGCCCCTCAGAATTTTTACTGCATT 21605953 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 || || || ||||| ||||| |||| | || || | || || | || || Sbjct 21605952 CATGTTGACAGAAAGTCTCCAGAATCTTTTTTTGCTGCTGTGAGGGGAATAGTCTCATGT 21605893 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 || |||||||| || | ||| |||| | || || ||||| || ||| |||| Sbjct 21605892 TTTGATAATGTCTTTATTTCTAGTCAGTTAGAGAGTGTTGTATATGCTTCATGGAGCAGA 21605833 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 ||||| || ||| | ||||| ||| ||||| | || |||| ||| | | ||||| | Sbjct 21605832 GTGCAGGCAGACATTAACTGCATGAAAGACCT-CTACAGA-AGAAGTTCAAACTGGAAAT 21605775 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028 || || | || || || | ||||| || ||||||||||| Sbjct 21605774 ACCTAATAAACCTCTGTGGCATGGACTTTCCAATAAAGACCAA 21605732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348161787010488