Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq9637 639 2e-178 >seq9637 Length=1534 Score = 639 bits (708), Expect = 2e-178 Identities = 826/1133 (73%), Gaps = 12/1133 (1%) Strand=Plus/Plus Query 81459 TTGGCAAAATCTTCCAGATCAGCCAGGGACTTTTGCTTGATCCCCTGCCAGAAGACCACC 81518 ||||| ||| |||||| || || || ||||||||||| || |||||||| |||||| Sbjct 169 TTGGCCAAACGTTCCAGTTCCAACAAAGATTTTTGCTTGATACCTTGCCAGAACACCACC 228 Query 81519 AGTCCGCCGGTGGTCTCGAAGACCTCGACCTTACCGTGCTTGACGTAGGTCTCGTTGTAG 81578 || ||||| ||||| || || ||| || ||||||| ||| |||| || | ||||| Sbjct 229 AGACCGCCTGTGGTTTCAAAAACCGACACGTTACCGTACTTTTCGTATGTTTGATTGTAC 288 Query 81579 GAAGAATTGAACATAGTCTCTAGCTGAGTCAGGGCCTTATCCTTGATACAGGCCAAACCT 81638 || | ||||| || | ||||| | | || |||| || | || |||| | Sbjct 289 GAGGCGTTGAAGATCTGTTGTAGCTTATTTAGAGCCTGATTACGCGTCTAGTCCAACACA 348 Query 81639 GGGTCCGAGATGTTAACAGGGGTCTTCTTGGAGAGGAAGGTGGCCGTCATCTTGGACGAG 81698 ||||| || ||||| || ||||| || || || || || ||||| || | || Sbjct 349 GGGTCGGACATGTTCACTTCTTGTTTCTTAGACAGAAAAGTTGCAGTCATTTTAGCAGAA 408 Query 81699 GTGAAGTGAAGGGAGTCGTGGGTCTCGGCGCGGATGGTGCGGTCTGAACTCTCCCAGTAG 81758 | ||||| ||||| | || |||| || || || || || || |||||| || Sbjct 409 GAAAAGTGGTACGAGTCTTCGGCTTCGGAACGAATAGTACGTTCCGAGGCTTCCCAGAAG 468 Query 81759 GCGTACTGACAGGTGGTATTCTGCTCATCTTCCACGTCCCAGGAGAGCACGGAGTCGCCC 81818 | | |||||||||| ||||| ||| || | | |||||||||| ||| ||||| | Sbjct 469 GTGAGCTGACAGGTGACATTCTTCTCGTCCTGTATATCCCAGGAGATCACCGAGTCTGCA 528 Query 81819 CGCTCCAAAAAGGCCACCAGCTTGTGGGTCTTCTTGTGG-GAATTC-CACTGCCCATAGT 81876 || || | ||| ||||||| | ||||||||| || | | |||||| | || || | ||| Sbjct 529 CGTTCAAGAAAAGCCACCAACCTGTGGGTCT-CTGGCGCAGAATTCGCTCTTCCAA-AGT 586 Query 81877 CCTCGACCATGCTGTAGTTGGCGATCAGGTAGAACTTATCAGCGTTCTCCCCGAAGTAC- 81935 | || || ||||||| | || | | | ||||| || ||||| || || ||||| Sbjct 587 CAGAAACAATAGTGTAGTTCGGGAAAATGAAAAACTTGTCGGCGTTTTCTCCAAAGTAGC 646 Query 81936 -----TTCCCGTTGGTCTTGTTGTAGAAGGGAGAGATGTCGACCACGTCACCGGTGGAGG 81990 || | ||||| ||| ||||| ||||| ||||| ||||||||||| ||||| | Sbjct 647 TGGTATTGCGATTGGTTCCGTTATAGAAAGGAGAAATGTCAACCACGTCACCCGTGGACG 706 Query 81991 TGGCGAAGAAGTGATAGGGGTACTTGGAGCGGGCGGTGGTCACCGTCACCATGCAGTTAA 82050 ||||||| || || || || |||||||| || || || || | |||||||| ||||| | Sbjct 707 TGGCGAAAAAATGGTAAGGATACTTGGAACGCGCAGTAGTGATGGTCACCATACAGTTCA 766 Query 82051 GGCTGCAGGTCTCGCGGTAGAGCCAGGTGCTGCCGCGGGTGTGGTACTGCTCCTTGACGG 82110 | | |||||||| || |||||||||||||| |||||| |||| |||| |||||||| | Sbjct 767 GATTACAGGTCTCACGATAGAGCCAGGTGCTACCGCGGCTGTGCCACTGATCCTTGACCG 826 Query 82111 TGACGTAGCGGGTGCTATGGGTGTTGGAGTAGTCGTCGGGGATGAGCTTCATG-GTCTTG 82169 | ||||| ||| |||| ||||||||||| || |||||| | || | || | | || ||| Sbjct 827 TCACGTAACGGATGCTGTGGGTGTTGGAATAATCGTCGAGCATTA-CTAGACGCGTTTTG 885 Query 82170 TTCTCGTAGCTGTCCTCGTGATAGGCCACAAAGACGGTGTCCCCCATGACCTTGCTGTAG 82229 || || ||||||||| ||||| ||||| || || ||| | | || || |||||| Sbjct 886 TTTTCATAGCTGTCCCTATGATACGCCACGAAAACCGTGCCTGCTATAACGCGGCTGTAA 945 Query 82230 GAATTGTAGCACTGTCCGTTGTTATTGATGAAATGCACCTCCCACATGGGGGGTGGCACG 82289 ||| |||||||||| | || | | ||||| ||| | ||||||||| || || | |||| Sbjct 946 GAACTGTAGCACTGACTGTGGCTGTTGATATGATGAATCTCCCACATAGGAGGCGCCACG 1005 Query 82290 TACTCCGTGTTGGAGCCCAGCAGGTAGGTACTGTAGATGTAGGCGTAGCTGCGGCGGAAG 82349 || ||||||||| ||||||||| || || ||| |||||| |||||||| || || || Sbjct 1006 TATTCCGTGTTGCTGCCCAGCAGATAAGTGGTGTGGATGTAAGCGTAGCTACGACGAAAC 1065 Query 82350 GTGAGCACCTTTTGAAAGACACGTACCTTGAAAGTGTGCGCCTGGATGTTGCGCTTGTAG 82409 || | ||||| || |||| |||||||| || |||||||| ||||||||| |||||| Sbjct 1066 GTCAAAACCTTCTGGTAGACCCGTACCTTAAAGGTGTGCGCGACGATGTTGCGTTTGTAG 1125 Query 82410 ACCACCATCATACCTTCGTCCAGGTCCTCCTTGGTGGGCTTGACCGAGGTGCAGTGGATG 82469 |||||||| || || ||||||||||| || ||| ||||||| | || ||||||| ||| Sbjct 1126 ACCACCATGATGCCCTCGTCCAGGTCTTCATTGATGGGCTTCATCGGGGTGCAGACGATA 1185 Query 82470 TTCCGGTCGAAGCGGATGAGGTCCGTCCCCTGGGCCATGGAGCAGACACGATAGGGATAC 82529 || || || ||||| || || ||||| |||||||||||||| || || |||||||| ||| Sbjct 1186 TTACGTTCAAAGCGAATAAGATCCGTACCCTGGGCCATGGAACACACGCGATAGGGGTAC 1245 Query 82530 TTGCTGATGTTGACCCCGATGACATCGTCCGGCCGCAGGGTGGTGTTGAAGAT 82582 ||| || |||||||||| | ||||| | | ||||| |||||| |||| Sbjct 1246 TTGGTGGTGTTGACCCCCACCACATCCCCATACTTGAGGGTAGTGTTGTAGAT 1298 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 81276 GCCTCGGCGATCTGGGCCAAAGCTTTGTTGATGTAGTTGCGCAGCGTGTCGTAGGTGAAC 81335 |||||||||||||| ||||| || ||||||||| |||||| ||| || ||||||||| Sbjct 1 GCCTCGGCGATCTGCGCCAACGCCCGATTGATGTAGCTGCGCAACGTATCATAGGTGAAC 60 Query 81336 TGCAACTGAGCGTA 81349 |||| ||||||||| Sbjct 61 TGCAGCTGAGCGTA 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771107308921440