Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq25194 113 3e-20 >seq25194 Length=36020201 Score = 113 bits (124), Expect = 3e-20 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| |||||||| || | ||||||||| || || || || ||||| | || Sbjct 29884421 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGAAAACCATAAACTGGTCCCAAATC 29884480 Query 25833 TCCATCTTCCCTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 ||| || || ||| |||| ||| ||| |||||||| || || | |||||||| || | Sbjct 29884481 TCCCTCCTCTCTGGTGCTGAAA-CCCTGCTTATCCAGGAACTCACGCGAACCATTAGCAT 29884539 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||||||| || || || | ||||||||||||| ||||| || || Sbjct 29884540 CCCAGATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC 29884588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340033085494476