Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq9637 1972 0.0 >seq9637 Length=1534 Score = 1972 bits (2186), Expect = 0.0 Identities = 1362/1539 (88%), Gaps = 24/1539 (2%) Strand=Plus/Plus Query 83276 GCTTCTGCGATTTGCGCCAGCGCCCGGTTGATGTAACCGCGCAACGTGTCATAGGTGAAC 83335 || || ||||| ||||||| |||||| |||||||| | ||||||||| |||||||||||| Sbjct 1 GCCTCGGCGATCTGCGCCAACGCCCGATTGATGTAGCTGCGCAACGTATCATAGGTGAAC 60 Query 83336 TGCAGCTGGGCGTAGACCAGATTGTGCACCGATTCCATGTTGGATAAATGAGTTGCATTG 83395 |||||||| ||||||| || ||| | || ||||| | | | | || | | Sbjct 61 TGCAGCTGAGCGTAGAGCACATTTCGTACAGATTCGCTTTCAAGCGACAGGGTGGTCGTA 120 Query 83396 TTGCCATCTGTACTTCTTTTGGTTCTATTATGAGTAAGATTCAGACTGGAGCGGTTGGCC 83455 ||||| |||||||| ||||||||| | || |||| || ||||| |||||| Sbjct 121 TTGCCC---GTACTTCTCTTGGTTCTAC---GCGTGGAGTTCACACCGGAGCTATTGGCC 174 Query 83456 AAACGTTCGAGTTCCACCAGAGATTTTTGCTTGATACCTTGCCAGAACACTACCAAACCA 83515 |||||||| ||||||| || |||||||||||||||||||||||||||||| |||| ||| Sbjct 175 AAACGTTCCAGTTCCAACAAAGATTTTTGCTTGATACCTTGCCAGAACACCACCAGACCG 234 Query 83516 CCAGTGGTTTCAAAGACGGACACGTTTCCATATTTTTCATATGTTTGATTGTATGAAGTA 83575 || ||||||||||| || |||||||| || || ||||| |||||||||||||| || | Sbjct 235 CCTGTGGTTTCAAAAACCGACACGTTACCGTACTTTTCGTATGTTTGATTGTACGAGGCG 294 Query 83576 TTGAAAATCTGCTGTAACTTATTTATAGCCTCATCACGTACGCAGTCCAGCGCAGAGTCG 83635 ||||| ||||| |||| |||||||| ||||| || ||| |||||| | ||| |||| Sbjct 295 TTGAAGATCTGTTGTAGCTTATTTAGAGCCTGATTACGCGTCTAGTCCAACACAGGGTCG 354 Query 83636 GACATGTTCACCTCTTGCTTCTTAGATAAGAAAGTGGCGGTCATTTTGGCAGAAGAAAAG 83695 ||||||||||| ||||| |||||||| | ||||| || |||||||| |||||||||||| Sbjct 355 GACATGTTCACTTCTTGTTTCTTAGACAGAAAAGTTGCAGTCATTTTAGCAGAAGAAAAG 414 Query 83696 TGATACGAGTCCTCGGCTTCGGAACGAATGGTGCGTTCCGAGGCTTCCCAGAAAGTGAGT 83755 || |||||||| ||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct 415 TGGTACGAGTCTTCGGCTTCGGAACGAATAGTACGTTCCGAGGCTTCCCAGAAGGTGAGC 474 Query 83756 TGACAAGTGACATTCTTTTCGTCCTGTATATCCCAGGAGATCACCGAGTCCGCACGTTCA 83815 ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 475 TGACAGGTGACATTCTTCTCGTCCTGTATATCCCAGGAGATCACCGAGTCTGCACGTTCA 534 Query 83816 AGAAAAGCCACCAACCTGTGGGTCTCTAACGCAGAATTCGGTCTTCCAAAGTCGGAGACG 83875 ||||||||||||||||||||||||||| ||||||||||| |||||||||||| || || Sbjct 535 AGAAAAGCCACCAACCTGTGGGTCTCTGGCGCAGAATTCGCTCTTCCAAAGTCAGAAACA 594 Query 83876 ATAGTGTAGTTCGGAAAAATGAAAAACTTGTCGGCGTTTTCTCCAAAGTAGCTGGCATTG 83935 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 595 ATAGTGTAGTTCGGGAAAATGAAAAACTTGTCGGCGTTTTCTCCAAAGTAGCTGGTATTG 654 Query 83936 CGATTGGTTCCGTTGTAGAAAGGAGAAATGTCAACCACGTCACCCGTGGAAGTGGCGAAA 83995 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 655 CGATTGGTTCCGTTATAGAAAGGAGAAATGTCAACCACGTCACCCGTGGACGTGGCGAAA 714 Query 83996 AAATGATAAGGATATTTGGAGCGCGCAGTAGTGATGGTCACCATACAATTCAGATTACAG 84055 ||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 715 AAATGGTAAGGATACTTGGAACGCGCAGTAGTGATGGTCACCATACAGTTCAGATTACAG 774 Query 84056 GTCTCACGATAGAGCCAGGTGCTGCCGCGGCTGTGCCATTGATCCTTGACCGTCACGTAA 84115 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 775 GTCTCACGATAGAGCCAGGTGCTACCGCGGCTGTGCCACTGATCCTTGACCGTCACGTAA 834 Query 84116 CGGGTACTGTGGGTGTTGGAATAATCGTCGGGCATTAATTGCATGGTTTTGTTTTCATAG 84175 ||| | |||||||||||||||||||||||| |||||| | | ||||||||||||||| Sbjct 835 CGGATGCTGTGGGTGTTGGAATAATCGTCGAGCATTACTAGACGCGTTTTGTTTTCATAG 894 Query 84176 CTGTCCCTATGATAAGCCACGAAAACCGTGCCTGCTATAACGCGGCTGTAGGAACTGTAG 84235 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 895 CTGTCCCTATGATACGCCACGAAAACCGTGCCTGCTATAACGCGGCTGTAAGAACTGTAG 954 Query 84236 CACTGACTGTGGCTGTTGATATGATGAATCTCCCACATAGGAGGCGCCACGTATTCCGTG 84295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 955 CACTGACTGTGGCTGTTGATATGATGAATCTCCCACATAGGAGGCGCCACGTATTCCGTG 1014 Query 84296 TTGCTGCCCAGCAGATAAGTGGTGTGGATGTAAGCGTAGCTACGACGAAACGTCAAAACC 84355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 TTGCTGCCCAGCAGATAAGTGGTGTGGATGTAAGCGTAGCTACGACGAAACGTCAAAACC 1074 Query 84356 TTCTGGTAGACTCGTACCTTAAAGGTGTGCGCGACGATGTTGCGTTTGTAGACCACCATG 84415 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1075 TTCTGGTAGACCCGTACCTTAAAGGTGTGCGCGACGATGTTGCGTTTGTAGACCACCATG 1134 Query 84416 ATGCCCTCGTCCAGGTCTTCATTGATGGGCTTCATCGAGGTGCAGACGATATTACGTTCA 84475 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1135 ATGCCCTCGTCCAGGTCTTCATTGATGGGCTTCATCGGGGTGCAGACGATATTACGTTCA 1194 Query 84476 AAGCGAATAAGATCCGTACCCTGGGCCATAGAACACACGCGATAGGGGTACTTGGTGGTA 84535 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1195 AAGCGAATAAGATCCGTACCCTGGGCCATGGAACACACGCGATAGGGGTACTTGGTGGTG 1254 Query 84536 TTGACCCCCACCACATCTCCGTACTTGAGGGTAGTGTTGTAGATGGTCTCGTTAACACCA 84595 ||||||||||||||||| || ||||||||||||||||||||||| |||||||| | | | Sbjct 1255 TTGACCCCCACCACATCCCCATACTTGAGGGTAGTGTTGTAGATAGTCTCGTTGGCTCTA 1314 Query 84596 TGGCTGACCGTTTGGGAAGAAGTTACGCGTTG---AGAGACTGAACCGGATCGAGAGTGA 84652 || ||||| | || ||||| || ||| |||| ||||||||| | || | | Sbjct 1315 TGACTGACGGCTTCAGAAGACGTCACGTGTTGAGAAGAGACTGACCGGGTTTG------- 1367 Query 84653 GCAGCAGACGTCGTATGAGAGGAATGG---TGACTGTGAGTAGCAGAAGTTCCACG---A 84706 ||||||||||||| |||| | |||| | ||||||||| ||||||| || | | Sbjct 1368 --AGCAGACGTCGTACGAGAAGTATGGCTTCCATTGTGAGTAGAAGAAGTTGCATGAGAA 1425 Query 84707 GTAGAAGATGAGGAAACCGCAGCACCCAGACAGACGATACACAAGTTAACGCAGACTACC 84766 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1426 GTAGAAGAAGAGGAAACCGCAGCACCCAGACAGACGATACACAGGTTAACGCAGACTACC 1485 Query 84767 AGGCACCAGATCCTGGATTCCATGTTCGTCGCGGGCCAA 84805 ||||||||||||||||||||||||||||||||||||||| Sbjct 1486 AGGCACCAGATCCTGGATTCCATGTTCGTCGCGGGCCAA 1524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753701596061120