Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq25194 93.3 4e-14 >seq25194 Length=36020201 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| ||| ||||| | || |||||||||||||| || ||||| Sbjct 29880883 AGCCCTGTGACATGGGCAATCATGTAAGTAAGCAGTGAATAGCTGGCAATATTGAAAGGC 29880942 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||| ||||| |||||||| || || || || || | ||||| ||| Sbjct 29880943 ACTCCTAGTCCCATATCTCCAGACCTCTGGTAGAGTTGGCATGATAATTCACCATCAAGA 29881002 Query 20357 ACATAAAATTGACA 20370 ||||| || || || Sbjct 29881003 ACATAGAACTGGCA 29881016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441233701362080