Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq25033 122 2e-22 >seq25033 Length=1520908 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || | || || ||||| | ||| ||| || ||||| || |||| Sbjct 769881 CATG-CCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGT 769823 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || |||||||| ||||| | || || || |||||||||| | ||| || Sbjct 769822 CAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTG 769763 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||| || ||||||||||||||||| || || ||||| || || || | || || | | Sbjct 769762 GTGGAATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCT 769703 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 769702 CCACCTCCAGAGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 769651 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||| | ||| ||| || ||||| || ||||| | || ||||| || ||| Sbjct 770090 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 770031 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || ||||||||||| | ||| || | || || |||||||| ||| Sbjct 770030 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 769971 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || ||||| || || || | || || | || ||||| || ||||| ||| Sbjct 769970 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTC 769911 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || |||||||| Sbjct 769910 TTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 769879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179273337713736