Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq25086 84.2 2e-11 seq12986 84.2 2e-11 seq25033 82.4 7e-11 >seq25086 Length=707082 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || ||||| || || |||||||||||||||||| ||||||||||||| | ||| ||| Sbjct 60612 GAGACCGGCACACCCTACATGCTCTACAAAGACTCCTGCAACAGGAAGAGCAACCAGCAG 60553 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 ||| |||| || || ||||| || || || || | ||||| Sbjct 60552 AACCTGGGCACCATCAAATGCAGCAACCTATGTACAGAAAT 60512 >seq12986 Length=1393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || ||||| || || |||||||||||||||||| ||||||||||||| | ||| ||| Sbjct 986 GAGACCGGCACACCCTACATGCTCTACAAAGACTCCTGCAACAGGAAGAGCAACCAGCAG 1045 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 ||| |||| || || ||||| || || || || | ||||| Sbjct 1046 AACCTGGGCACCATCAAATGCAGCAACCTATGTACAGAAAT 1086 >seq25033 Length=1520908 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 || ||| ||||| || || |||||||| ||||| || || || | ||| ||| Sbjct 769863 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATC 769804 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 |||| || || || ||| | ||||| | |||||||| || ||||||||||||||||| Sbjct 769803 TTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGAATGCCTTCTTTATC 769744 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 || || || || | || | |||||| | ||| || || ||||| | || Sbjct 769743 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 769684 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || || ||||| || ||||| Sbjct 769683 CTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 769651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451860751191520