Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq25033 140 8e-28 >seq25033 Length=1520908 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| ||||| ||||| || || ||||| |||| ||||||||||| || || | |||||| Sbjct 769863 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATC 769804 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || |||||||| | | ||||||||| || ||| |||||| || Sbjct 769803 TTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGAATGCCTTCTTTATC 769744 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || | |||||| | | || || |||| ||||| || Sbjct 769743 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 769684 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || |||||||| || || Sbjct 769683 CTTGCCTGTCAGGGTCTTCACAAAGATCTG 769654 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| ||||| ||||| || || ||||| |||| ||||||||||| || || | ||||| Sbjct 770091 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 770032 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || |||||||| || | ||||||||| || ||| |||||| || Sbjct 770031 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 769972 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| |||||| || | |||||| | | || || |||| ||||| || Sbjct 769971 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGT 769912 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || ||||| || || Sbjct 769911 CTTGCCAGTAAGGGTCTTGACAAAGATCTG 769882 Score = 105 bits (116), Expect = 2e-17 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| ||||| || ||||| |||| ||||||||| | || ||| | |||||| Sbjct 769635 CAGCACTAAGTGCAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATC 769576 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||||| || |||||||| | | ||||||||| || ||| ||||| || Sbjct 769575 CTCCAGCTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCTGGCGGAATGCCTTCCTTGTC 769516 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 ||| ||||| |||||| |||| |||||| Sbjct 769515 CTGGATCTTGGCCTTCACATTCTCGATGGTGTC 769483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178540774429204