Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq25033 141 9e-29 seq25185 84.2 2e-11 >seq25033 Length=1520908 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 769879 ATGCAGATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTGGAAGTTGAGCCCAGT 769938 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| |||||||| || |||||| | ||||| Sbjct 769939 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCTGACCAG 769998 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | ||| ||||| |||||||| || | ||||||||| ||||||||| Sbjct 769999 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 770058 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| | || || ||| | |||||||| |||| || ||| Sbjct 770059 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGGC 770106 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| |||||||| | || || ||| ||| Sbjct 769651 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 769710 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| || ||||| || ||||| | ||||| Sbjct 769711 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATTCCACCAGACCAG 769770 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | ||| ||||| |||||||| || | |||||||| ||||||||| Sbjct 769771 CAGAGGTTGATCTTCGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 769830 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| | || || ||| | ||||||||| ||||||| ||| Sbjct 769831 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTGAGAGGTGGC 769878 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| || || ||||| | ||||| ||| | | || | ||| ||||| Sbjct 769507 AAGATCCAGGACAAGGAAGGCATTCCGCCAGACCAGCAGAGATTGATCTTCGCTGGCAAG 769566 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 |||||||| || | ||||| || ||||||||||||||| |||||| | || ||||| Sbjct 769567 CAGCTGGAGGATGGACGCACTCTGTCCGACTACAACATCCAGAAGGAATCTACTCTGCAC 769626 Query 38448 TTGGTGCTGCGTTTGAGAGGCGGC 38471 || |||||||| | || || ||| Sbjct 769627 TTAGTGCTGCGCCTCAGGGGTGGC 769650 >seq25185 Length=22297774 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || ||| ||| ||||| ||| |||||||| || ||||| ||||| | || | Sbjct 15031339 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGCCCTGGCATCAGGCCCCTCTTCT 15031398 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||||||||| || || || ||||||||||||| ||| || || || || || | Sbjct 15031399 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 15031458 Query 133037 CCACCA 133042 | |||| Sbjct 15031459 CAACCA 15031464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500015170542080