Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq25179 132 2e-25 seq25024 96.9 1e-14 seq25150 87.8 7e-12 >seq25179 Length=14121063 Score = 132 bits (146), Expect = 2e-25 Identities = 467/720 (65%), Gaps = 17/720 (2%) Strand=Plus/Minus Query 450896 ATGTCTGTCAAAAAAGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGT 450955 ||||||| |||| ||||| || || || || || ||||| | || || || ||| Sbjct 11468149 ATGTCTGGCAAAGGGCCGGCAATCGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGT 11468090 Query 450956 GTTTACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCT 451015 || | ||| |||| || || || || || || || |||||||| ||||| || || Sbjct 11468089 GTCTTCCAGCATGGCAAAGTGGAGATCATCGCTAACGACCAAGGGAACCGAACCACACC- 11468031 Query 451016 TCATGGGTAAGT----TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAA 451070 || | || || || || ||| |||| | || | || | || || || | | | Sbjct 11468030 -CA--GCTATGTGGCCTTCACTGATACAGAGCGCCTCATTGGTGATGCAGCCAAGAACCA 11467974 Query 451071 TGGTAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGT 451130 ||| | || | | ||||| | | ||||||||||||| | || ||||| | || Sbjct 11467973 -GGTGGCTATGAACCCTACCAACACCATCTTTGATGCTAAACGTCTCATCGGCCGCAAGT 11467915 Query 451131 ATGATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAA 451190 ||||||| || || || || | || || | | ||| || ||| | | Sbjct 11467914 ATGATGACCCCACGGTGCAGTCGGATATGAAGCACTGGCCCTTCCGTGTGGTGAATGACA 11467855 Query 451191 AAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAG 451250 || |||||| | | ||||| | || |||||||| | || ||||| || || | Sbjct 11467854 GTGGCAAGCCCAAGGTGCAAGTGGAGTACAAAGGTGAGATGAAGACTTTCTTCCCAGAGG 11467795 Query 451251 AAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC 451310 | || |||||||| || || || ||||| || | || || ||| | || | | Sbjct 11467794 AGATCAGCTCTATGGTCCTAACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGG-CGC 11467736 Query 451311 CAGTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 | | | || ||| || ||||| || || ||||| |||||||| | || || || || Sbjct 11467735 AAAGTGCAGAATGCTGTCATTACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCT 11467676 Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 || |||||||| || || ||||| | ||||| | || ||||| ||||| || ||| Sbjct 11467675 ACCAAAGATGCTGGCACCATCACTGGTCTTAATGTGATGCGTATTATCAATGAGCCCACA 11467616 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA----AACAGAAGaaaaaaaTAT 451485 ||||||||| |||| ||||| || ||| || || | | | | || || ||| | Sbjct 11467615 GCAGCTGCTATAGCCTATGGTCT-GGACAAGAAAGGTACTCGAGCTGGTGAGAAGAATGT 11467557 Query 451486 TTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG 451545 | | ||||| || || || || ||| |||| || | ||| | ||||| ||||| Sbjct 11467556 GCTCATCTTTGACTTGGGAGGGGGTACTTTTGATGTGTCCATCCTTACTATTGAGGATGG 11467497 Query 451546 GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | |||||||| ||| | || |||||| || ||||| || || || || |||| || Sbjct 11467496 AATCTTTGAAGTGAAGTCCACAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAA 11467437 Score = 104 bits (114), Expect = 9e-17 Identities = 395/607 (65%), Gaps = 26/607 (4%) Strand=Plus/Minus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTC 451953 || |||||||| || || || ||||| || || || || || || | |||| | | Sbjct 11467144 GAGATTGTGCTGGTGGGTGGCTCTACTCGTATCCCCAAGATCCAGAAGCTGTTACAGGAC 11467085 Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013 ||||| | || ||| | || |||||| | || |||||||| |||||||| || Sbjct 11467084 TTCTTCAAT----GGCAAAGAGCTCAACAAGAGCATCAACCCTGATGAGGCTGTTGCTTA 11467029 Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070 ||||||||||| |||||||||||||| | || ||| | ||| || | || Sbjct 11467028 CGGTGCTGCAGTGCAAGCAGCTATTCTCATGGG---AGACAAGTCTGAGAATGTGCAGGA 11466972 Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130 | | ||| | | ||||| || || || || || || |||| |||||||||||| |||| Sbjct 11466971 TCTGCTGCTGTTGGATGTCACCCCCCTGTCCCTGGGCATTGAGACAGCTGGTGGAGTGAT 11466912 Query 452131 GACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTAC 452190 |||| | | || || || || ||||||| ||| | | ||| || || | | Sbjct 11466911 GACTGCTCTCATCAAGCGCAACACCACTATTCCCACCAAACAAACTCAGACCTTCA--CC 11466854 Query 452191 AGCAAGT--GATAACCA-ACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAAT 452247 | | | | || ||||| | || |||| | || || | ||| || ||| | || || Sbjct 11466853 ACCTATTCAGACAACCAGAGCA-GTGTCCTGGTCCAGGTATATGAGGGTGAAAGGGCTAT 11466795 Query 452248 GACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAG 452307 |||| || || || || || | ||| || | ||| || || || | Sbjct 11466794 GACAAAGGACAACAACTTGCTGGGCAAGTTTGACCTAACGGGCATCCCCCCAGCACCCCG 11466735 Query 452308 GGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAG 452367 ||| || || || || | || | |||| | ||||| ||||||||||| ||||| || Sbjct 11466734 TGGAGTCCCCCAGATCGAGGTCACTTTTGATATCGATGCCAATGGTATTCTGAATGTCAG 11466675 Query 452368 TGCAGTTGA-AAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAAC 452425 ||| || || || | || || || |||| || || || || || ||||| || Sbjct 11466674 TGCTGTGGACAAGAGCA--CGGGTAAGGAGAACAAGATCACCATCACCAATGACAAGGGT 11466617 Query 452426 CG-TTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGA 452484 || ||| | || || || ||||| ||||| | |||||||| |||| ||| | || Sbjct 11466616 CGCCTTAGC-AAGGATGACATTGACCGTATGGTGCAAGAAGCAGAGAAATACAAAGCAGA 11466558 Query 452485 TGATGAA 452491 |||||| Sbjct 11466557 GGATGAA 11466551 >seq25024 Length=1579651 Score = 96.9 bits (106), Expect = 1e-14 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| ||| | ||||| || || ||||||||||| | || || || || || ||||||| Sbjct 1096548 ATGCTGTAGTGACTGTCCCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 1096607 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | ||| ||||| || | ||||| || |||||||| ||||| || ||||| ||||| Sbjct 1096608 CTGGAACCATTGCAGGGCTCAATGTCCTGCGAATTATCAATGAGCCAACAGCTGCTGCGA 1096667 Query 451440 TAGCATATGGACT 451452 |||| ||||| || Sbjct 1096668 TAGCCTATGGTCT 1096680 >seq25150 Length=5065642 Score = 87.8 bits (96), Expect = 7e-12 Identities = 84/107 (79%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246 |||| |||||| |||||||||| || | ||||| | || ||||| ||||||||| Sbjct 2972123 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 2972182 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| ||||||| | || || ||||| ||||||||||| Sbjct 2972183 GAAGAAATTTCTGCTATGGTCTTGACAAAGATGAAGGAAACAGCAGA 2972229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975080186154896