Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq25179 159 3e-33 seq25035 102 6e-16 seq25024 102 6e-16 >seq25179 Length=14121063 Score = 159 bits (176), Expect = 3e-33 Identities = 904/1435 (63%), Gaps = 22/1435 (2%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | ||||| ||||||||||||||||| | |||||| ||||| || || || ||||| Sbjct 11466672 GCACTGACATTCAGAATACCATTGGCATCGATATCAAAAGTGACCTCGATCTGGGGGACT 11466731 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | | || || ||||| || | | ||| | ||||| || || || || Sbjct 11466732 CCACGGGGTGCTGGGGGGATGCCCGTTAGGTCAAACTTGCCCAGCAAGTTGTTGTCCTTT 11466791 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGA-TAGTA-ACTACAGTTTGATTATCTGAAT 517436 || | | ||||||||| | | |||| || | ||| | | || || ||||||| Sbjct 11466792 GTCATAGCCCTTTCACCCTCATATACCTGGACCAGGACACTGC--TCTGGTTGTCTGAAT 11466849 Query 517437 AAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 517495 | || || || |||| | || ||| ||||| || ||||| | | || | | Sbjct 11466850 AGGTGGTGAA-GGTCTGAGTTTGTTTGGTGGGAATAGTGGTGTTGCGCTTGATGAGAGCA 11466908 Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||||| ||||| || | || || || || || |||||||| | || | Sbjct 11466909 GTCATCACTCCACCAGCTGTCTCAATGCCCAGGGACAGGGGGGTGACATCCAACAGCAGC 11466968 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || || | || ||| | | || | |||||||||||||| | |||||||| Sbjct 11466969 AGATCCTGCACATTCTCAGACTTGTCTCCCATGAGAATAGCTGCTTGCACTGCAGCACCG 11467028 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-T 517674 || |||||||| |||||||| || | | | || || | ||| |||||||| || | Sbjct 11467029 TAAGCAACAGCCTCATCAGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCC 11467088 Query 517675 TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATG 517734 || || | || | | ||| || ||||||| || || || || | ||||| || || Sbjct 11467089 TGTAACAGCTTCT-GGATCTTGGGGATACGAGTAGAGCCACCCACCAGCACAATCTCTTG 11467147 Query 517735 CACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGC 517794 | ||| || || || || | ||| | | | || || || || || || | Sbjct 11467148 GATCTGGCCCTTGTCTAGCTTGGCATCACGCAGAGCCTTCTCCACTGGCTCCAGGGTGCC 11467207 Query 517795 TCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATC 517854 | || | |||| | || || || || || | |||| || | | | || Sbjct 11467208 ACGGAAAAGATCTGCATTGAGCTCCTCAAAGCGGGCACGGGTAATAGAGGTGTAGAAGTC 11467267 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 ||| || ||||| | || |||| ||||| ||| ||| || ||||| || | || Sbjct 11467268 AATACCCTCGAAAAGGGAGTCAATCTCAATGCTAGCTTGTGTGGAAGAGCTGAGGGTGCG 11467327 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAA 517972 || || | ||||| || || | || | | | || ||| ||| | | Sbjct 11467328 CTTTGCCCTCTCACAAGCCGTACGCAGCCGCCTCACCGC--GCGCTTGTTGCCAGCAATG 11467385 Query 517973 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAA 518030 || || | || | |||||| ||||| |||| ||| | || | ||| || |||| Sbjct 11467386 TCACGCTTGTGCTTACGCTTGAATTCTTC--CACAAAATGGTTCACCATACGGTTGTCAA 11467443 Query 518031 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 518090 | || || || |||| | || | || | || | | |||| || | |||||| | Sbjct 11467444 AGTCCTCCCCACCCAGATGGGTGTCACCAGCTGTGGACTTCACTTCAAAGATTCCATCCT 11467503 Query 518091 CAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 518150 ||| || | | | |||||| || || || |||| ||||| || || |||||| Sbjct 11467504 CAATAGTAAGGATGGACACATCAAAAGTACCCCCTCCCAAGTCAAAGATGAGCACATTCT 11467563 Query 518151 TTTCTTTGTCTTG------GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 | || || | || || || |||||||| || | |||||| || || || | Sbjct 11467564 TCTCACCAGCTCGAGTACCTTTCTTGTCCAGACCATAGGCTATAGCAGCTGCTGTGGGCT 11467623 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||| ||||| | || ||||||||||||| || | || |||||||| || || || | Sbjct 11467624 CATTGATAATACGCATCACATTAAGACCAGTGATGGTGCCAGCATCTTTGGTAGCCTGGC 11467683 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 || || || || || || ||||| || ||||| || |||| |||| || | Sbjct 11467684 GCTGGGAGTCATTGAAGTAAGCAGGCACTGTAATGACAGCATTCTGCACTTTGCGCCCCA 11467743 Query 518325 TATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 ||| || || | | ||||| || ||| | ||| || || | |||||| Sbjct 11467744 GATAGGCCTCAGCAATCTCCTTCATCTTGGTTAGGACCATAGAGCTGATCTCCTCTGGGA 11467803 Query 518385 AATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAA 518444 | | ||| ||| || || |||| | | || || || |||| | Sbjct 11467804 AGAAAGTCTTCATCTCACCTTTGTACTCCACTTGCACCTTGGGCTTGCCACTGTCATTCA 11467863 Query 518445 TAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTAC 518504 || || ||||||| |||||||| || || || | |||||| | | | | | Sbjct 11467864 CCACACGGAAGGGCCAGTGCTTCATATCCGACTGCACCGTGGGGTCATCATACTTGCGGC 11467923 Query 518505 CAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGG 518564 | || | ||||| |||||||| || || ||||| || || || || | || | |||| Sbjct 11467924 CGATGAGACGTTTAGCATCAAAGATGGTGTTGGTAGGGTTCATAGCCACCTGGTTCTTGG 11467983 Query 518565 CTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGAT 518624 ||||||| ||||| || | ||||| || || || | ||||| || || || || | Sbjct 11467984 CTGCATCACCAATGAGGCGCTCTGTATCAGTGAAGGCCACATAGCTGGGTGTGGTTCGGT 11468043 Query 518625 TACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 | ||||| || || || || || || ||||| |||| || | ||||| || || Sbjct 11468044 TCCCTTGGTCGTTAGCGATGATCTCCACTTTGCCATGCTGGAAGACACCCACGCA 11468098 >seq25035 Length=2404758 Score = 102 bits (112), Expect = 6e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| ||||| ||| | || ||||| ||||| || |||||| | ||| | | | ||||| Sbjct 84080 TGTTGTAGCTACAGTGGCGTTTGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 84021 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||||||||| || || ||| | || ||| ||||| ||||||||||| ||||| ||||| Sbjct 84020 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTACCAAGAAATTGGGAGAGCTGGTCG 83961 Query 367113 TGATGG 367118 |||||| Sbjct 83960 TGATGG 83955 >seq25024 Length=1579651 Score = 102 bits (112), Expect = 6e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 518531 GTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 518590 |||||||||||||| |||||| |||| | || || ||||| || |||| ||||| Sbjct 1095776 GTATTGGTTGGATTCATTGCAACTTGGTTCTTTGCGGCATCGCCGATCAACCTCTCTGTA 1095717 Query 518591 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 518650 ||||| || | || || |||||| || | ||||| |||||||| ||||| ||||| Sbjct 1095716 TCTGTGAAGGCCACGTAGCTTGGAGTGGTCCTGTTACCCTGATCATTGGCAATGATTTCC 1095657 Query 518651 ACTTTACCATTTTGCCATACACCTACACA 518679 || || |||| ||| ||||||| ||||| Sbjct 1095656 ACCTTCCCATGTTGGAATACACCAACACA 1095628 Score = 86.0 bits (94), Expect = 5e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||| | |||| |||||| || || ||||||||||| | |||||| || |||||||| Sbjct 1098345 TTATCCACAGCAGACACATTCAGGATGCCATTGGCATCAATATCAAAGGTTACTTCAATC 1098286 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 ||||| || ||||| ||||||| ||||| || Sbjct 1098285 TGAGGTACACCTCTGGGAGCAGGGGGGATACC 1098254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779571297511672