Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq25179 311 1e-79 seq25024 190 3e-43 >seq25179 Length=14121063 Score = 311 bits (344), Expect = 1e-79 Identities = 1038/1599 (65%), Gaps = 36/1599 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || || || || ||||| ||||| |||||||| || || | Sbjct 11466551 TTCATCCTCTGCTTTGTATTTCTCTGCTTCTTGCACCATACGGTCAATGTCATCCTT-GC 11466609 Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| | ||||| ||||| || || || ||||| | ||||||| | ||| || Sbjct 11466610 TAAGGCGACCCTTGTCATTGGTGATGGTGATCTTGTTCTCCTTACCCGTGCTCTTGTCCA 11466669 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 ||||||| ||||||| ||||||||| ||||| | ||| || | || | || || || Sbjct 11466670 CAGCACTGACATTCAGAATACCATTGGCATCGATATCAAAAGTGACCTCGATCTGGGGGA 11466729 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 || | ||||| | || || ||||||| ||||| | || || || |||| ||| Sbjct 11466730 CTCCACGGGGTGCTGGGGGGATGCCCGTTAGGTCAAACTTGCCCAGCAAGTTGTTGTCCT 11466789 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTG 6864 | | | | | |||||| ||||| || | | | ||| || || || ||| Sbjct 11466790 TTGTCATAGCCCTTTCACCCTCATATACCTGGACCAGGACACTGCTC--TGGTTGTCTGA 11466847 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 || | |||| | || || || | ||||| || || || | | || | | Sbjct 11466848 ATAGGTGGTGAAGGTCTGAGTTTGTTTGGTGGGAATAGTGGTGTTGCGCTTGATGAGAGC 11466907 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 ||||| | ||||| || || | || || ||||| || || || ||||| || | Sbjct 11466908 AGTCATCACTCCACCAGCTGTCTCAATGCCCAGGGACAGGGGGGTGACATCCAACAGCAG 11466967 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 ||| || || ||| || | || ||| | | || || ||||| || | || || Sbjct 11466968 CAGATCCTGCACATTCTCAGACTTGTCTCCCATGAGAATAGCTGCTTGCACTGCAGCACC 11467027 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 ||| || || |||||||| ||||| || | || || || ||||| || || || | || Sbjct 11467028 GTAAGCAACAGCCTCATCAGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTC 11467087 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 | ||||| | || || || ||||| || || || ||||| |||| || || || | Sbjct 11467088 CTGTAACAGCTTCTGGATCTTGGGGATACGAGTAGAGCCACCCACCAGCACAATCTCTTG 11467147 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224 | | || || | ||| | || || || | || || || || |||| Sbjct 11467148 GATCTGGCCCTTGTCTAGCTTGGCATCACGCAGAGCCTTCTCCACTGGCTCCAGGGTGCC 11467207 Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 |||||| | || | || |||||||| || ||||||||||| || || ||||| || Sbjct 11467208 ACGGAAAAGATCTGCATTGAGCTCCTCAAAGCGGGCACGGGTAATAGAGGTGTAGAAGTC 11467267 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT---AACGT 7341 || || ||| | | || ||||| |||||| | | ||||| | ||||| | || Sbjct 11467268 AATACCCTCGAAAAGGGAGTCAATCTCAATGCTAGCTTGTG---TGGAAGAGCTGAGGGT 11467324 Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401 |||||||| | |||||| ||||| || | || | | || ||| ||| || | ||| Sbjct 11467325 GCGCTTTGCCCTCTCACAAGCCGTACGCAGCCGCCTCACCGCGCGCTTGTTGCCAGCAAT 11467384 Query 7402 ATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAA 7461 || ||| || ||||| || || ||||| || || | | | || || Sbjct 11467385 GTCACGCTTGTGCTTACGCTTGAATTCTTCCACAAAATGGTTCACCATACGGTTGTCAAA 11467444 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521 || || ||||||| || || || || || || | || ||||||||||| || | || Sbjct 11467445 GTCCTCCCCACCCAGATGGGTGTCACCAGCTGTGGACTTCACTTCAAAGATTCCATCCTC 11467504 Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGT 7581 ||| | | | || |||||||| ||||| || |||| |||||| ||||| || ||| | Sbjct 11467505 AATAGTAAGGATGGACACATCAAAAGTACCCCCTCCCAAGTCAAAGATGAGCACATTCTT 11467564 Query 7582 ATCGTCGTCT------TTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || ||||| || ||||| || || ||||| || || || || || Sbjct 11467565 CTCACCAGCTCGAGTACCTTTCTTGTCCAGACCATAGGCTATAGCAGCTGCTGTGGGCTC 11467624 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||| |||||||| | ||| || || |||| || || | |||||||| || || || | Sbjct 11467625 ATTGATAATACGCATCACA-TTAAGACCAGTGATGGTGCCAGCATCTTTGGTAGCCTGGC 11467683 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || || || || ||||| || || || || | ||| || | | ||||| || | Sbjct 11467684 GCTGGGAGTCATTGAAGTAAGCAGGCACTGTAATGACAGCATTCTGCACTTTGCGCCCCA 11467743 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 |||| | || || || || ||||| ||||| || ||||| || ||||| || | | Sbjct 11467744 GATAGGCCTCAGCAATCTCCTTCATCTTGGTTAGGACCATAGAGCTGATCTCCTCTG-GG 11467802 Query 7815 CAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 | | || ||| | ||||| || | || |||| | | |||| || || ||| | Sbjct 11467803 AAGAAAGTCTTCATCTCACCTTTGTACTCCACTTGCACCTTGGGCTT----GC--CACTG 11467856 Query 7874 GGGATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 | ||| | | | ||| | |||||||| || ||| |||| | || Sbjct 11467857 TCATTCACCACACGGAAGGGCCAGTGCTTCATATCCGACTGCACCGTGGGGTCATCATAC 11467916 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | ||||| ||||| || |||||||| | ||||| | |||||||| || ||| Sbjct 11467917 TTGCGGCCGATGAGACGTTTAGCATCAAAGATGGTGTTGGTAGGGTTCATAGCCACCTGG 11467976 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || || || || || || || || || || || || || | |||| Sbjct 11467977 TTCTTGGCTGCATCACCAATGAGGCGCTCTGTA---TCAGTGAAGGCCACATA-GCTGGG 11468032 Query 8051 -GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 || ||||| |||||||||||||| || || || || || | | | || |||| || Sbjct 11468033 TGTGGTTCGGTTCCCTTGGTCGTTAGCGATGATCTCCACTTTGCCATGCTGGAAGACACC 11468092 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||| || ||||| || || | || || |||||||| Sbjct 11468093 CACGCAGGAGTACGTGGTGCCCAGGTCGATGCCGATTGC 11468131 >seq25024 Length=1579651 Score = 190 bits (210), Expect = 3e-43 Identities = 366/540 (68%), Gaps = 0/540 (0%) Strand=Plus/Minus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || || ||||| ||||| || | || ||||| ||||| || || || Sbjct 1097346 GCACCGTAAGCCACAGCTTCATCAGGGTTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 1097287 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || ||||| || ||||| || || || ||||| |||| || || Sbjct 1097286 AAATCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGAGCCACCAACCAGCACAATG 1097227 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | || || |||| ||| | || || || | || || || || |||| Sbjct 1097226 TCATGGATCTGGGACTTGTCGAGCTTGGCATCCCGCAGAGCCTTCTCCACTGGATCCAGT 1097167 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||| | ||| ||| || ||||| || || | ||| |||||||| ||| Sbjct 1097166 GTGCCACGGAAGAGGTCAGCGTTCAGCTCTTCAAAGCGAGCTCTGGTGATGGATGTGTAG 1097107 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| ||| || || | || ||||||||||| | | || | | ||||| | Sbjct 1097106 AAGTCAATGCCCTCATAGAGAGAGTCAATTTCAATACTGGCCTGGGTGCTAGAAGACAGA 1097047 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || | ||||||| |||||| ||| | Sbjct 1097046 GTACGCTTGGCACGCTCGCATGCTGTGCGGAGGCGACGAACTGCACGCTTGTTCTCACTG 1096987 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || || ||||| || || || || ||||| || ||| || | | | ||| Sbjct 1096986 ATGTCCTTCTTGTGCTTGCGCTTGAACTCAGCAATGAAATGGTTCACCATGCGGTTGTCG 1096927 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||||||||||||||| || || || || || | ||| || || |||||||| || Sbjct 1096926 AAGTCTTCACCACCCAAGTGGGTGTCACCTGCAGTGGATTTCACCTCGAAGATACCATCT 1096867 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | || ||||| || || ||||| || |||||||| ||||| || ||| Sbjct 1096866 TCAATAGTCAGAATGGATACATCGAAGGTGCCACCTCCAAGGTCAAAGATGAGAACATTC 1096807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634932637898080