Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq25185 87.8 3e-12 seq25086 87.8 3e-12 seq12986 87.8 3e-12 >seq25185 Length=22297774 Score = 87.8 bits (96), Expect = 3e-12 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 |||| ||||||||||| || || |||||||| || ||||| ||||| || || || | Sbjct 15031464 TGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTT 15031405 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGG 26001 |||| ||| ||| ||| ||||| |||||| ||||| ||||| || || || ||||| Sbjct 15031404 GGCTGAAGAAGAGGGGCCTGATGCCAGGGCTG-ACTTTCTCCAATGAACTTATTAGCAGA 15031346 Query 26002 GACGAGG 26008 || |||| Sbjct 15031345 GATGAGG 15031339 >seq25086 Length=707082 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 ||||| || ||| ||||||||| | ||| |||||||| ||||||||||| |||||||| Sbjct 60485 ACCTCCTCTTTGCTGGTATACTCCACGATTTCTGTACATAGGTTGCTGCATTTGATGGTG 60544 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCG 221851 ||||||| | || || ||| | ||| | ||| ||||||||||| |||| | Sbjct 60545 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTG 60604 Query 221852 CCAGTCTC 221859 || ||||| Sbjct 60605 CCGGTCTC 60612 >seq12986 Length=1393 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 ||||| || ||| ||||||||| | ||| |||||||| ||||||||||| |||||||| Sbjct 1113 ACCTCCTCTTTGCTGGTATACTCCACGATTTCTGTACATAGGTTGCTGCATTTGATGGTG 1054 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCG 221851 ||||||| | || || ||| | ||| | ||| ||||||||||| |||| | Sbjct 1053 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTG 994 Query 221852 CCAGTCTC 221859 || ||||| Sbjct 993 CCGGTCTC 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928552074561280