Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq25179 147 1e-29 seq25024 95.1 8e-14 >seq25179 Length=14121063 Score = 147 bits (162), Expect = 1e-29 Identities = 368/552 (67%), Gaps = 8/552 (1%) Strand=Plus/Minus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| || || || | || || || ||| || || | ||| | || |||| ||| Sbjct 11468131 GCAATCGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGTGTCTTCCAGCATGGCAAA 11468072 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || || || || || || |||||||| || |||| ||||| ||||| | || ||| Sbjct 11468071 GTGGAGATCATCGCTAACGACCAAGGGAACCGAACCACACCCAGCTATGTGGCCTTCACT 11468012 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | || ||||| ||||| || || | || | || || ||| || Sbjct 11468011 GATACAGAGCGCCTCATTGGTGATGCAGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 11467952 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || || |||||||||||| | | || || || || | |||||| |||| || || || Sbjct 11467951 ACCATCTTTGATGCTAAACGTCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGTCG 11467892 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC- 474627 |||||| || ||||| || ||| | |||| |||| || || | | ||| Sbjct 11467891 GATATGAAGCACTGGCCCTTCCGTGTGGTGAATGACAGTGGCAAGCCCAAGGTGCAAGTG 11467832 Query 474628 -AATACACGCAGGTGAAACTAA-ACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | |||| |||||| | || || | ||| || || | || || ||||| || Sbjct 11467831 GAGTACAA--AGGTGAGATGAAGACTTTCTTC-CCAGAGGAGATCAGCTCTATGGTCCTA 11467775 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744 |||| ||||| | | || ||| | ||||| || | |||| |||| || || Sbjct 11467774 ACCAAGATGAAGGAGATTGCTGAGGCC-TATCTGGGGCGCAAAGTGCAGAATGCTGTCAT 11467716 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||| || || || || || ||||| || || || || || || |||||||| || | || Sbjct 11467715 TACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCTACCAAAGATGCTGGCACCAT 11467656 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 | ||||||||||| | |||||||| ||||| || |||||||| || | || ||||| Sbjct 11467655 CACTGGTCTTAATGTGATGCGTATTATCAATGAGCCCACAGCAGCTGCTATAGCCTATGG 11467596 Query 474865 TCTTGATAAGAA 474876 ||| || ||||| Sbjct 11467595 TCTGGACAAGAA 11467584 >seq25024 Length=1579651 Score = 95.1 bits (104), Expect = 8e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 ||||| || |||||||||||||| || ||||| |||||||| || |||||||||||||| Sbjct 1098254 GGTATCCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGATGCC 1098313 Query 476150 AATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||||| || || ||||| ||||| ||||| Sbjct 1098314 AATGGCATCCTGAATGTGTCTGCTGTGGATAA 1098345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267097734991376