Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq25211 235 6e-57 seq25143 161 1e-34 >seq25211 Length=34478284 Score = 235 bits (260), Expect = 6e-57 Identities = 601/909 (66%), Gaps = 7/909 (1%) Strand=Plus/Plus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| ||||| || || || |||||| || ||| || | Sbjct 21605148 TGTGTCGCAAATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 21605207 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| ||| |||||||| | |||||| ||| || | Sbjct 21605208 TATTAGCAAAGAAGTGGTG---GTTTCGTAAGATCCAGTTTAGGTCTCCTACCCCAAAAA 21605264 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | || || || |||| || ||||| | || ||||| | ||| | Sbjct 21605265 CACAGACAGAGCGAACATGAACTCCACTGCATGGTGGGTAGGGTGCACCTTTGGACACAT 21605324 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 | ||||| | ||||||||||| ||||| | ||| | || | |||||| || || | Sbjct 21605325 CCCCTTCAAAATACTGCCACTTGACAAATCGGGCCAGTGCATTCATGTCAGAAACATCAT 21605384 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 |||||| || || | ||| ||||| ||||| | || || | ||| | || |||||| Sbjct 21605385 ATTTGT-CACTAGAAGAAACTGCACCTGGAACTTCAGGGATTCTCTGAATTGTTGCCCAC 21605443 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 | || || || |||||||| ||||| || | |||||| || |||| ||| ||| Sbjct 21605444 AAGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCATTCAATAAACTGAAGTATTTTGCTG 21605503 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | |||| ||| | |||| | || ||||| || || || || || || Sbjct 21605504 CTTTCTAATACGTATTCAACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAA 21605563 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | |||||| | |||||| || ||||| | || | Sbjct 21605564 ATTGGAGTACTGAGAGGCGGTAGTTGTTTGTCTATGCCTGTGTTCTTTATTTTACCATCA 21605623 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | | || | || |||||||| || || | ||||| ||| || || Sbjct 21605624 ATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGTTTCC 21605683 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || || |||| ||||| | Sbjct 21605684 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATT 21605743 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| | || || | |||||| | ||| ||||| || | || || ||| Sbjct 21605744 GGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTTCTTCTGTAGAGG 21605803 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| ||||||||||| | |||||| ||||| || || || ||||| Sbjct 21605804 TCTTTCATGCAGTTAATGTCTGCCTGCACTCTGCTCCATGAAGCATATACAACACTCTCT 21605863 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | ||| | | |||||| ||||| ||||| || || |||||| ||| | ||| || Sbjct 21605864 AACTGACTAGAAATAAAGACATTATCAAAACATGAGACTATTCCCCTCACAG-CAGCAAA 21605922 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | ||||| ||| || || | ||| || | |||||||| || ||||| Sbjct 21605923 AAAAGATTCTGGAGACTTTCTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGAT 21605982 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | || || | || || | |||||| || || |||| | ||| || ||||| ||||| Sbjct 21605983 TGATCTTAGAAGTCTGTCAAGCATCTCAATTTTGTGATACACCACTATTGAGTAAGCTAT 21606042 Query 160943 CGGAAACTC 160951 ||||| || Sbjct 21606043 TGGAAATTC 21606051 >seq25143 Length=5469902 Score = 161 bits (178), Expect = 1e-34 Identities = 612/941 (65%), Gaps = 36/941 (4%) Strand=Plus/Minus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || ||||||||||||| ||| |||| || |||||| Sbjct 1487370 CTGTGGCGCAGGTGCTCCTCCAGACATTGGATAGCGGCGTCGTCCACCAAGGGGTCGAAC 1487311 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | ||| || |||||| ||||||| || |||| | Sbjct 1487310 TTGTTGGCCAAGAGGTGGTG---CTGCTGGAGCATCCAGGGCACGTCGCCCACCCCGTAG 1487254 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 | ||||| || || |||| |||| |||| |||||||| | || || || | Sbjct 1487253 ATACAGACTGAGCGCTGGTGCCGGCCGGTGCAGGGCGGGTAGGGCGCGCCCTTGCTGGTG 1487194 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || ||||| |||||| || | | || | | | |||||| ||| || | Sbjct 1487193 TCCCCCTCCAGGTACTCCCACTTGACCAGGCGGGGCAGGGAGTTCATGTCCGAGAGGTGG 1487134 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || ||| | ||| ||||| || ||||||| ||| | || |||||||| Sbjct 1487133 AACTTGTCACTCGAGGGCATGGCGCCGGGCACACCGGGCACACGGTTGAGCGTGGCCCAG 1487074 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCT 160402 | ||| ||||| |||||||| |||||||| | ||| || | ||||| || || | | | Sbjct 1487073 ACGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACTGCTGCGCT--GCGT 1487016 Query 160403 -GTCC-CGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAG 160460 |||| || || | ||| ||| ||| | ||| || || | ||||||| |||| | | Sbjct 1487015 GGTCCTCGAAG-ATGTGCTGCACGAAGGCGCGGGTGACCACGACGTACGCGTTGCCCGTG 1486957 Query 160461 AATAT-CGGTA--TGGGTATAGGCGGC-GTGTCTTTGT-CCTGACCGGTGTTAGACACCA 160515 || || |||| || | |||||| || |||| || ||| |||| || | | Sbjct 1486956 AACATATGGTAGTTGTGGGGCGGCGGCAGTTTCTTGGTGGCTGTCCGG-----GAGATGA 1486902 Query 160516 CTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGT- 160574 | ||| ||| | | || | | || ||| | || |||| ||| | | || | Sbjct 1486901 ---CCTTCCCCACCTCATGGTGGTACTGCCAGCGCTCCCGCTTGAGCGCCGAC-GGCTTC 1486846 Query 160575 TCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTC 160634 |||| ||| | ||||| || | ||| | ||||| ||| || || || Sbjct 1486845 TCCGACTCCATGCTGTTCCGCCCCTGCAGCAACTTCAGGGCACGGACTATTTCGGCATTA 1486786 Query 160635 GTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA---TTTCGCGCTC 160691 ||||||| || || || || ||||| ||| | || || | ||| | | |||| Sbjct 1486785 GTCTTGATGGGGAAATCAGTGCCGCAGGTGTTGAGGACATAGTGCCAGGGCATGGGGCTC 1486726 Query 160692 AGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTAC 160751 | ||||||| |||||| || | || ||||||| ||| |||||| || || Sbjct 1486725 ---TGCAACAGGTCCTGCATGCAGTTGAGGTCGGCCTGCAGCCGGGACCAGGAGGCATAG 1486669 Query 160752 ACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACC 160811 || |||| || || || ||||| || || || ||| || | |||| || | Sbjct 1486668 ACCACGTCTTCCAGGCGGCTCGCCACGAACACATTGGGGAAGCAAGCTGCGATGGCCCTC 1486609 Query 160812 ACCG---CCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTC 160868 || | || | ||| | || | | ||| ||| | ||| ||||| || | |||| Sbjct 1486608 ACGGCTTCCTGGAAG-GCGGCTGA--GGACTTGTTGTCAATGTGGACGCAGTAGACGTTC 1486552 Query 160869 TGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACG 160928 || || || |||| || || || | ||||||||||||||| || || | |||||| || Sbjct 1486551 TGGGGGGCATAGAGGGACCGCAGGAGCCTCTCGAACATCTCGATTTTGTCATGGATGACC 1486492 Query 160929 ATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 || |||||||| || || ||||| ||| || | ||||| Sbjct 1486491 ATGGAGTAGGCAATGGGGAACTCTTCCTCTTCTTGGCTCAG 1486451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577037289369120