Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq25193 132 9e-26 >seq25193 Length=27607347 Score = 132 bits (146), Expect = 9e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438 || ||||||||||| ||| | |||||||| || ||||| || |||||||| || ||||| Sbjct 4736278 GCTTTATGGTGGTATTATGTCTCTAAAGGAATCGAATATTTGGATACAGTATTCTTCATC 4736337 Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498 || ||||| || ||||| || |||| || || || || ||||| |||||||| ||||| Sbjct 4736338 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTTACCATGTTC 4736397 Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 || || | ||| | |||||||| ||| ||||||| || || Sbjct 4736398 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 4736438 Score = 98.7 bits (108), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 || |||||||| |||||| |||| | ||||| ||||| |||||||| | |||||||| Sbjct 4738672 GCTTTTTTCGGAGCTCAGATGAACGCGTTTATTCATGTCATTATGTACATGTATTATGGA 4738731 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | || || ||||| | || ||| |||| || | ||||||||||| ||| | || ||| Sbjct 4738732 TTAGCTGCCTGTGGCCCTAAATTTCAAAAATACCTGTGGTGGAAGCGATACTTGACCATA 4738791 Query 58661 ATGCAATTGGTA 58672 ||||| ||||| Sbjct 4738792 CTGCAACTGGTA 4738803 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 58669 GGTACAATTCCATATAGCTATAGGACATACCGCTATGTCCATTTACATAGATTGCCCGTT 58728 ||| || |||||| | |||| || || || || |||| ||||| || ||||| || || Sbjct 4739280 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 4739339 Query 58729 TCCAAAATGGACGCAATGGTCAGTTATCATCTATTCTATTACTTTTATATTATTGTTTGG 58788 || || |||| ||| ||| || || ||||| |||| || || || || ||||||| Sbjct 4739340 CCCTAAGTGGATGCACTGGGGTGTAATTTTCTATGCTATCACCTTCATTTTCCTGTTTGG 4739399 Query 58789 TAACTTCTATTTTAGAACATACAAGA 58814 ||||||||| | | | ||||| |||| Sbjct 4739400 TAACTTCTACTATCGGACATATAAGA 4739425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903126489960320