Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq25194 104 3e-17 >seq25194 Length=36020201 Score = 104 bits (114), Expect = 3e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || || ||||| | |||||| || ||||| || |||||||| || ||||| Sbjct 29880879 CTTTAGCCCTGTGACATGGGCAATCATGTAAGTAAGCAGTGAATAGCTGGCAATATTGAA 29880938 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || || ||||| || || ||||||||||| || ||||| || | || || || Sbjct 29880939 AGGCACTCCTAGTCCCATATCTCCAGACCTCTGGTAGAGTTGGCATGATAATTCACCATC 29880998 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 || || |||||||| ||| ||||| || |||| ||||| Sbjct 29880999 AAGAACATAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 29881043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583304113756800