Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq12986 87.8 2e-12 seq25086 82.4 9e-11 >seq12986 Length=1393 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | || || || |||| || || ||||| || ||||| |||||||| ||||||||| Sbjct 959 TGGTACGCCATCATCGAGTCGCAGACTGAGACCGGCACACCCTACATGCTCTACAAAGAC 1018 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 |||| ||| ||||| || || |||| |||| ||||| | ||| || ||| Sbjct 1019 TCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGCAACCTATGT 1078 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040 ||||||||| |||| | ||| |||||| ||| Sbjct 1079 ACAGAAATCGTGGAGTATACCAGCAAAGAGGAG 1111 >seq25086 Length=707082 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 104906 TCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 104965 || || || ||||| || ||||| |||||||| ||||||||| |||| ||| ||||| Sbjct 60621 TCGCAGACTGAGACCGGCACACCCTACATGCTCTACAAAGACTCCTGCAACAGGAAGAGC 60562 Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 || || |||| |||| ||||| | ||| || |||||||||||| |||| | | Sbjct 60561 AACCAGCAGAACCTGGGCACCATCAAATGCAGCAACCTATGTACAGAAATCGTGGAGTAT 60502 Query 105026 ACAGACAAAGATGAG 105040 || |||||| ||| Sbjct 60501 ACCAGCAAAGAGGAG 60487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583076985358880