Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq25033 138 3e-27 >seq25033 Length=1520908 Score = 138 bits (152), Expect = 3e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| ||||| ||||| |||||||| || |||| ||||| || | || || | |||||| Sbjct 770091 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 770032 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||||||||| || | || ||||| || ||||| ||||| ||||| Sbjct 770031 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTC 769972 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| || |||||||| || || || || | ||||| || Sbjct 769971 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGT 769912 Query 225681 CTTGCCCGT 225689 |||||| || Sbjct 769911 CTTGCCAGT 769903 Score = 132 bits (146), Expect = 1e-25 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || | ||| ||||| ||||| || |||| ||||| |||| || ||| | ||||| Sbjct 769635 CAGCACTAAGTGCAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCATC 769576 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| ||||||||||| | || || ||||| |||||||| ||||||||||| Sbjct 769575 CTCCAGCTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCTGGCGGAATGCCTTCCTTGTC 769516 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| ||||||| ||||||||||| Sbjct 769515 CTGGATCTTGGCCTTCACATTCTCGATGGTGTC 769483 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| ||||| ||||| |||||||| || |||| ||||| || | || || | ||||| Sbjct 769863 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATC 769804 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||| ||||||||||| | | || ||||| || ||||| ||||| || || Sbjct 769803 TTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGAATGCCTTCTTTATC 769744 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||||| || |||||||| || ||||| || | ||||| || Sbjct 769743 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 769684 Query 225681 CTTGCCCGTCA 225691 |||||| |||| Sbjct 769683 CTTGCCTGTCA 769673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192145978137128