Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq25194 113 3e-20 >seq25194 Length=36020201 Score = 113 bits (124), Expect = 3e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 |||||| ||||| || || |||||||| || || || || |||||||| || || || || Sbjct 29880882 TAGCCCTGTGACATGGGCAATCATGTAAGTAAGCAGTGAATAGCTGGCAATATTGAAAGG 29880941 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326 || || || ||||| || || |||||||||||||| || || || | || ||||| Sbjct 29880942 CACTCCTAGTCCCATATCTCCAGACCTCTGGTAGAGTTGGCATGATAATTCACCATCAAG 29881001 Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 || || ||||| || | ||| ||||| ||||| | |||||| || Sbjct 29881002 AACATAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCATCAG 29881046 Score = 113 bits (124), Expect = 3e-20 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| |||||||| || |||||||| || || || || || ||||||| || Sbjct 29884421 CATATCTTTGTATTCTGCTCCAAAGTGCCTCCACTGAAAACCATAAACTGGTCCCAAATC 29884480 Query 27549 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 |||||| || ||| |||| ||| ||| ||| |||| || || | ||||| || || | Sbjct 29884481 TCCCTCCTCTCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGCGAACCATTAGCAT 29884539 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||||||| || || || | ||||||||||||| ||||| || || Sbjct 29884540 CCCAGATCTTCACACCTTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC 29884588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369393661060772