Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01-
02] 25,212 sequences; 1,117,373,619 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq25033 109 1e-18
>seq25033
Length=1520908
Score = 109 bits (120), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| || || || || || ||||||||||| || | | || | |||||||
Sbjct 770090 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 770031
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| |||||||||||||| | | || ||||| || ||
Sbjct 770030 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCC 769971
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| |||| | | |||| ||| ||| ||||| || || ||
Sbjct 769970 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACTTCCAGGGTGATG 769914
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || ||||| || |||| ||||||
Sbjct 769913 GTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCAT 769879
Score = 105 bits (116), Expect = 2e-17
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| || || || || || ||||||||||| || | | || | ||||||
Sbjct 769862 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCT 769803
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| | |||||||||||| | | || ||||| || ||
Sbjct 769802 TCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGAATGCCTTCTTTATCC 769743
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| |||| | | |||| ||| ||| || || ||||| ||
Sbjct 769742 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCCACCTCCAGAGTGATG 769686
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || |||||||| |||| ||||||
Sbjct 769685 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 769651
Score = 84.2 bits (92), Expect = 5e-11
Identities = 110/150 (73%), Gaps = 7/150 (5%)
Strand=Plus/Minus
Query 151962 TTCCCGGCGAAGA-TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| || ||||||| | |||||||||||||| | | || ||||| || || || |||||
Sbjct 769336 TTGCCAGCGAAGAATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTT 769277
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCC 152077
| || ||| |||| | | |||| ||| ||| || ||||| || || || |||||
Sbjct 769276 TGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCAAGGGTGATGGTCTTGCC 769220
Query 152078 CGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || |||||||| |||| |||||| ||
Sbjct 769219 AGTAAGGGTCTTCACAAAGATCTGCATGTT 769190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153448082709252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |