Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melopsittacus_20undulatus_20[refseq_20GCF_5F000238935.1_202012-01- 02] 25,212 sequences; 1,117,373,619 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq25033 134 1e-26 >seq25033 Length=1520908 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| | || ||| || || || ||| ||||| ||||||||||| || Sbjct 769881 CATGCCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 769822 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || || |||||||| | |||||| |||| Sbjct 769821 AGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCTGG 769762 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || ||| ||||| ||||| | | |||||||| || || Sbjct 769761 TGGAATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 769702 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || || ||||| || || ||||||||||| ||||| |||||| Sbjct 769701 CACCTCCAGAGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATG 769650 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | || ||| || || || ||| ||||| ||||||||||| || | Sbjct 770105 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 770046 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || ||||||||||| || || ||||||| | |||||| || | || Sbjct 770045 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGA 769986 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||||| || ||| ||||| ||||| | | |||||||| || || || Sbjct 769985 ATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACT 769926 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || ||||| || || |||||||| || ||||| |||||| Sbjct 769925 TCCAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATCTGCATG 769878 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | || ||| | ||| || || ||||| ||||||||||| || Sbjct 769653 CATGCCACCCCTGAGGCGCAGCACTAAGTGCAGAGTAGATTCCTTCTGGATGTTGTAGTC 769594 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || ||||||||||| || || |||||||| | |||||| |||| Sbjct 769593 GGACAGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAATCTCTGCTGGTCTGG 769534 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||||| | | |||||||| || || Sbjct 769533 CGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTC 769474 Query 44287 CACCTCCA 44294 |||||||| Sbjct 769473 CACCTCCA 769466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359879785299804