Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq37467 176 5e-39 >seq37467 Length=38624 Score = 176 bits (194), Expect = 5e-39 Identities = 138/165 (84%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 ||| || || |||| |||||| | ||||||||| ||||| ||||||||||| |||||||| Sbjct 3636 CTCCAGCCCTGTGATGTGGGCAATCATGTAGGTGAGCAGTGAGTAGCTGGCAATGTTGAA 3577 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 |||||| ||||| ||||||||||| || | |||||| |||||||||||||| || || Sbjct 3576 GGGCACTCCCAGTCCCATGTCCCCAGACCTCTGGTAGAGCTGGCAGGAGAGTTCACCCTT 3517 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 | ||||||||||||||||||| |||||| || ||||| ||||| Sbjct 3516 CAGCACGTAGAACTGGCACAGGGCGTGGCACGGGGGCAGAGCCAT 3472 Score = 116 bits (128), Expect = 4e-21 Identities = 119/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 |||| ||| | || || ||||||||||||||||| || || || |||||||||||||| Sbjct 1600 GTCCTTGTAGTCTGCTCCAAAGTGCCTCCACTGGAAGCCATACACTGGCCCCAGGTCCCC 1541 Query 146094 GGGCTCCCTGT-GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCC 146152 ||||||| || ||||| || | | ||||| |||||||||||||| ||||||| Sbjct 1540 CTCCTCCCTGGAGCTGAAGCCCTGCTTGTCC-AGGAACTCCCGGGACCCGTTAGCGTCCC 1482 Query 146153 AGATCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 ||||||| || || | || |||||||| |||| Sbjct 1481 AGATCTTCACACCTTTTGCAGAGAGCTCCTTGG 1449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589682193515960