Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq35761 149 8e-31 >seq35761 Length=4599 Score = 149 bits (164), Expect = 8e-31 Identities = 201/278 (72%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | ||||||||| |||||||||| | |||||||||||| Sbjct 287 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCAAAGTTCCAGGAGATGTCGTTGCGGCA 228 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 ||| || |||||| ||| ||| |||| | ||| |||| | ||||||| || Sbjct 227 CACCGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGG 168 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACC 83296 ||||| |||||| |||| | |||||| || || || |||| | |||| ||| Sbjct 167 GAAGGGCAGCGCCTCTTTCAGGAGAGTGAAGAGGGGGTGCGCGTCCTTCC--CGTTCACC 110 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||||| | || ||||| |||| | | ||||| |||||||| |||| || | Sbjct 109 TCGCACTTCTCGAACATGATGAAGTTGGGCTTGTACCCGTTGCCAGGACGAACGTACTCC 50 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 || | ||| |||||| | |||| | ||||||||| Sbjct 49 AGCGCGCGCAGGATCTCCTCGTTCTTAGAGTTTTCCTG 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608389674749960