Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq51860 136 3e-27
>seq51860
Length=4005
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| | ||||||| |||| ||||| ||||| || ||||| ||||| | |
Sbjct 3653 CCACCTCTCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 3712
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || |||||||| ||||| ||| | || || |||||||| || |||
Sbjct 3713 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGG 3772
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| ||||| | ||| || |||| |||||| |
Sbjct 3773 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACT 3832
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|||| |||||||||||| || |||| || || || || || ||||||||
Sbjct 3833 TCCAGGGTAATGGTCTTACCAGTTAGGGTCTTCACGAAGATCTGCATTTT 3882
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||| | ||||| | ||| | |||||||||||| || ||||| ||||| | |
Sbjct 3425 CCACCTCTCAGGCGCAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3484
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| | | || |||||||| ||||| ||| | || || |||||||| || |||
Sbjct 3485 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGG 3544
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| ||||| | ||| || |||| |||||| |
Sbjct 3545 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACT 3604
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||| || |||||||| || | ||||| ||||| || |||||
Sbjct 3605 TCCAGGGTGATTGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 3651
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||| || |||| ||| | ||||| | ||| | |||||||||||| || ||||| |||||
Sbjct 3193 GTTACCACCTCTCAGACGCAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 3252
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| |||||| | | || |||||||| ||||| ||| | || || |||||||| ||
Sbjct 3253 GGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 3312
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
||| | ||||||||||| |||||| ||||| | | | || |||| ||||||
Sbjct 3313 GGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTC 3372
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| ||| || |||||||| || | || || ||||| || |||||
Sbjct 3373 AACTTCCAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421983878952284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |