Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq51860 136 3e-27 >seq51860 Length=4005 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | ||||||| |||| ||||| ||||| || ||||| ||||| | | Sbjct 3653 CCACCTCTCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 3712 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||||||| ||||| ||| | || || |||||||| || ||| Sbjct 3713 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGG 3772 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | ||| || |||| |||||| | Sbjct 3773 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACT 3832 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 |||| |||||||||||| || |||| || || || || || |||||||| Sbjct 3833 TCCAGGGTAATGGTCTTACCAGTTAGGGTCTTCACGAAGATCTGCATTTT 3882 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | ||||| | ||| | |||||||||||| || ||||| ||||| | | Sbjct 3425 CCACCTCTCAGGCGCAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3484 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | || |||||||| ||||| ||| | || || |||||||| || ||| Sbjct 3485 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGG 3544 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | ||| || |||| |||||| | Sbjct 3545 ATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACT 3604 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| || |||||||| || | ||||| ||||| || ||||| Sbjct 3605 TCCAGGGTGATTGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 3651 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || |||| ||| | ||||| | ||| | |||||||||||| || ||||| ||||| Sbjct 3193 GTTACCACCTCTCAGACGCAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 3252 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | |||||| | | || |||||||| ||||| ||| | || || |||||||| || Sbjct 3253 GGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 3312 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | ||||||||||| |||||| ||||| | | | || |||| |||||| Sbjct 3313 GGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTC 3372 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| ||| || |||||||| || | || || ||||| || ||||| Sbjct 3373 AACTTCCAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421983878952284