Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq16767 123 5e-23
seq40465 84.2 4e-11
>seq16767
Length=29411
Score = 123 bits (136), Expect = 5e-23
Identities = 124/161 (77%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 51895 GCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATA 51954
|| ||||||| ||| ||| | || ||||| || || || |||||||| ||||| |||||
Sbjct 18379 GCTTTATGGTGGTATTATGTCTCTAAAGGAATTGAGTATTTGGATACAGTATTCTTCATC 18438
Query 51955 CTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTT 52014
|| ||||| |||||||| || | ||||| || || || ||||| ||||| || |||||
Sbjct 18439 CTGAGGAAGAAATTTAACCAAATCAGTTTCCTGCATGTCTATCACCATTTCACCATGTTC 18498
Query 52015 ACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
|| | | ||||| |||||||||||| |||| || || ||
Sbjct 18499 ACGTTGTGGTGGATTGGTATTAAATGGGTTGCAGGTGGACA 18539
Score = 98.7 bits (108), Expect = 2e-15
Identities = 103/133 (77%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|| || || ||||||||| | ||| | ||||| ||||| |||||||||| ||||||||
Sbjct 21109 GCTTTCTTCGGAGCTCAGATGAATGCGTTTATTCATGTCATTATGTACATGTATTATGGA 21168
Query 52117 ATGGCCGCTTGTGGTCCTATGTT-CAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || ||||| |||| || ||||| ||| || ||||||||||| || | || ||
Sbjct 21169 TTAGCTGCCTGTGGCCCTAAATTTCAGAA-GTACCTGTGGTGGAAACGATACTTGACCAT 21227
Query 52176 AATGCAGTTGGTA 52188
| |||| ||||||
Sbjct 21228 ATTGCAATTGGTA 21240
Score = 91.5 bits (100), Expect = 3e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 21742 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 21801
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
|| |||||||| || ||| || ||| ||||| || | | ||||| || || || ||
Sbjct 21802 CCCTAAATGGATGCACTGGGGTGTCATTTTCTATGCTGTCACCTTCATTTTCCTCTTCGG 21861
Query 52305 TAACTTCTATTTTAGAACATACAAG 52329
||||||||| | | | ||||| |||
Sbjct 21862 TAACTTCTACTATCGGACATATAAG 21886
>seq40465
Length=31615
Score = 84.2 bits (92), Expect = 4e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 189482 GAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACT 189541
|| || || |||||| | || | |||||||| ||||| |||||||| || || ||||||
Sbjct 2497 GAGGGCAAGATGCATGGCTTCCTGCGAATGTACTGGGCCAAGAAGATCCTGGAGTGGACT 2556
Query 189542 AGAACACCTGAAGACGCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGAC 189601
| | || || || || || | | | ||||| | ||| || ||||| || |||
Sbjct 2557 CGCTCCCCCGAGGAGGCCCTGCGGTTTGCCATCTACCTCAACGACCGCTACGAGCTGGAC 2616
Query 189602 GGCACGGATCCTAACGGATACGTAGG 189627
|| | |||||| ||||||||||||||
Sbjct 2617 GGGAGGGATCCCAACGGATACGTAGG 2642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922579423679960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |