Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq51377 363 1e-95 seq16373 100 2e-16 >seq51377 Length=985 Score = 363 bits (402), Expect = 1e-95 Identities = 653/949 (69%), Gaps = 14/949 (1%) Strand=Plus/Minus Query 107523 ATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGAC 107582 |||||||| || ||| || || |||||| || || | |||||| || | Sbjct 954 ATCAACTGCTCGGGGGTCGTCCGCGGGGACGAGCGCGCCATCCAGGAGGCCCGACTCAGC 895 Query 107583 AACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCAC--CTATTACCTCAACATAA 107640 ||||| || ||| |||| || || ||||| | || | | | ||||| ||||| | Sbjct 894 AACCTCGAGGTGGAGAACAAAAGG--GCCTCCCTGATGCCCGGCGACTACCTGAACATGA 837 Query 107641 CCAGAGACTGTGAGCGC-TTCAAG----GCCCAAAGGAAGTTCATACAGTTCCCACTGAG 107695 | || ||||| | |||| |||||| ||| || |||||| ||||||| ||||| Sbjct 836 CGAGGGACTGCG-GCGCCTTCAAGAAGAGCC----GGCGGTTCATTGAGTTCCCGCTGAG 782 Query 107696 TAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAA 107755 | || ||| || |||||| | |||||||| ||||| |||| || || || || | Sbjct 781 CCAGGAGGAGGAGGAGTTCCCCCTCGCCTACTCCATGGTCATCCACGACAAAATCGAGAT 722 Query 107756 CTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGA 107815 ||||| ||||| ||| | ||| | |||||||| |||||||| ||||| |||||| | || Sbjct 721 GTTTGAGCGGCTCCTGAGGGCCCTCTATGCCCCCCAGAACATCTACTGCGTCCACATTGA 662 Query 107816 TGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAA 107875 |||||||||| || ||| | ||||| | |||||| | ||||||||||||| Sbjct 661 CAGCAAGTCCCCAGCCACCTTCCAGGAGGCTGCACGGGCCATCGTGGCCTGCTTCCCCAA 602 Query 107876 TGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGC 107935 |||||| ||||||| ||| |||||| || ||||| |||||| | |||| || Sbjct 601 TGTCTTTGTGGCCAGCCGCCTGGAAAAGGTGGTCTACGCCTCTTGGTCCCGGCTGCAGGC 542 Query 107936 TGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAA 107995 ||||| ||||| ||| | ||| || | |||||| | ||||| ||| ||| | || || Sbjct 541 CGACCTAAACTGCATGCAGGACCTGTTGCAGAGCCCTGTGCCGTGGCGCTACCTCCTTAA 482 Query 107996 TACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGAT 108055 || ||||| || || |||||||| |||||||| |||||||| |||| |||| ||| | Sbjct 481 CACCTGCGGCACCGATTTCCCCATCAAGACCAACGCCGAGATCGTCCGCACCCTAAAGTT 422 Query 108056 GTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTG 108115 | | |||| ||||||||||||||| ||| || || | ||| | | ||||| Sbjct 421 GCTACAGGGACGGAACAGTATGGAGTCAGAGAAGCCCTCGGCCATCAAGCAGGAGCGCTG 362 Query 108116 GAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCC 108175 | | |||| | | || || || | | | | || | || | ||| || || || Sbjct 361 GCAGTACCACCACGAACTGGGGGAGTCCATCTCTCGGACAATCACAAAGAAAGAGCCGCC 302 Query 108176 CCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGT 108235 || | || | |||||||| ||||| || || || | ||| | | || ||||| || Sbjct 301 ACCCCACAACTACCCCATGTTTACAGGCAACGCGTACATCCTGGTCACACGGGCCTTCGT 242 Query 108236 CCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTA 108295 | || |||| || ||||| | | || | | || |||| ||| ||||| || Sbjct 241 GCGGCACATCTTTGAGAACCCCACGGCGCAGCAGTTCCTCGAGTGGGCCAAGGACACATA 182 Query 108296 TAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGT 108355 ||||| ||||| ||| ||||||||||||| | || ||| | |||| ||| | || Sbjct 181 CAGCCCTGACGAGCACGTCTGGGCCACCCTCAACCGCATGCCGGGTGTGCCGGGCGCGGT 122 Query 108356 TCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTG 108415 || || |||||| || |||||||||||| |||| | || | || |||||||| Sbjct 121 GCCCCAGAACGACAAGTACCAGCTCTCAGACATGAATGCCCTGCCCCGCCTGGTCAAGTG 62 Query 108416 GCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGC 108464 |||||||| |||||||| ||||| ||| ||||| || | |||||| Sbjct 61 GCAGTACCTGGAGGGAGACACCAGCAAGGGCGCGCCCTACCCGCCCTGC 13 >seq16373 Length=23388 Score = 100 bits (110), Expect = 2e-16 Identities = 198/289 (69%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCT 108335 || |||| |||||||| || ||||| || || |||| ||||| || |||| | | Sbjct 11972 GAGTGGGCAAAAGACACTTACAGCCCAGATGAGTACCTGTGGGCAACAATTCAAAGAA-T 12030 Query 108336 CCGTGGA-TGCCTGGCTCTGTTCCT---AGCCACCCCAAGTATCACATCTCAGACATGAC 108391 | || | | || || | |||||| || || |||||| || | || ||||||| Sbjct 12031 CTCTGAAGTCCCAGGTGCAGTTCCTTCTAGTGAC---AAGTATGACGTTTCTGACATGAA 12087 Query 108392 TGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCC 108451 ||| | |||||| | ||||||||||||||| ||||| || || || || || || Sbjct 12088 TGCACTGGCCAGGTTTGTCAAGTGGCAGTACTTTGAGGGCGACGTGTCCAAAGGTGCACC 12147 Query 108452 TTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCT 108511 || |||| ||| |||| | || | | |||| ||| |||| ||| ||||| Sbjct 12148 CTACCCACCATGCAGTGGAGTTCACGTTCGTTCTGTCTGTGTTTTTGGGGTCGGAGACCT 12207 Query 108512 GTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560 | ||||| | || | ||||| ||| |||| || |||||||||||| || Sbjct 12208 GAACTGGGTGCTGCGAAACCACCACTTCTTCGCTAACAAGTTTGACACG 12256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348041722103526