Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq51860 123 2e-23
>seq51860
Length=4005
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||||||||||| | | ||||||||||| ||| |||||||| ||||||||||||
Sbjct 3652 GCCACCTCTCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 3711
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
||| ||| | || ||||| || || || || || |||| || ||| || ||||| ||
Sbjct 3712 CAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGG 3771
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||| ||||||||| || || ||| || | | | | |||| | ||| ||
Sbjct 3772 GATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAAC 3831
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
|||| |||||| ||||| || || || |||||||| ||||| ||||| ||
Sbjct 3832 TTCCAGGGTAATGGTCTTACCAGTTAGGGTCTTCACGAAGATCTGCATTTT 3882
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||||| | | || | || || ||| ||||||||| |||||||||||| |
Sbjct 3197 CCACCTCTCAGACGCAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 3256
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || ||||| || || || || || |||| || ||| || ||||| ||
Sbjct 3257 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGG 3316
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| ||||||||| || || ||| || | | | | |||| | ||| ||
Sbjct 3317 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACT 3376
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| ||| || |||||||| ||||| |||||||||||||| ||||||
Sbjct 3377 TCCAGGGTGATTGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 3424
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||||||||||| | | || | || || ||| ||||||||| ||||||||||||
Sbjct 3424 GCCACCTCTCAGGCGCAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 3483
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
||| ||| | || ||||| || || || || || |||| || ||| || ||||| ||
Sbjct 3484 CAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGG 3543
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||| ||||||||| || || ||| || | | | | |||| | ||| ||
Sbjct 3544 GATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAAC 3603
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| ||| || |||||||| ||||| || ||||||||||| ||||||
Sbjct 3604 TTCCAGGGTGATTGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCATG 3652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394817603438479
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |