Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq51860 98.7 1e-15
>seq51860
Length=4005
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| ||||| || || ||||| || ||| || |||| || | ||||| ||||| || ||
Sbjct 3455 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCTTCCAGCTGCTTGCC 3513
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|||| ||||||| | ||||||||||| || || ||||| ||||| ||| || ||
Sbjct 3514 AGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTT 3573
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| ||||||| || || | ||| | |||||||| |||| ||
Sbjct 3574 CACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTCAGGGT 3633
Query 139747 TTTTACGAATATTTGCAT 139764
||| || || || |||||
Sbjct 3634 TTTCACAAAGATCTGCAT 3651
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| ||||| || || ||||| || ||| || |||| || | ||||| ||||| || ||
Sbjct 3227 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCA-TCTTCCAGCTGCTTGCC 3285
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|||| ||||||| | ||||||||||| || || ||||| ||||| ||| || ||
Sbjct 3286 AGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCCTGGATCTTAGCCTT 3345
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | || | ||||| ||||||| || || | ||| | |||||||| |||| ||
Sbjct 3346 CACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTCAGGGT 3405
Query 139747 TTTTACGAATATTTGCAT 139764
|| || || || |||||
Sbjct 3406 CTTCACAAAGATCTGCAT 3423
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | |||| || ||||| | || || || || || ||||| || |||
Sbjct 3652 GCCACCTCTCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 3711
Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655
|| |||| || | ||||| ||||| || |||||| ||||||| | ||||||||||| |
Sbjct 3712 CAGGGTGCGTCCA-TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGG 3770
Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715
| || ||||| ||||| ||| || || | | || | ||||| ||||||| |
Sbjct 3771 GGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAA 3830
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || | ||| | ||||| || || | || || ||||| || |||||
Sbjct 3831 CTTCCAGGGTAATGGTCTTACCAGTTAGGGTCTTCACGAAGATCTGCAT 3879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495732263400800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |