Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq5532 159 5e-34
seq51733 98.7 1e-15
>seq5532
Length=36385
Score = 159 bits (176), Expect = 5e-34
Identities = 232/325 (71%), Gaps = 6/325 (2%)
Strand=Plus/Minus
Query 8679 GGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCAC 8738
|||| |||| || ||||| ||||| || ||| |||| || ||| | | |||
Sbjct 5255 GGAAAGCGGTGAAGGGACAGCCTTTCACATTGTGGCAGATGAGCTTCTGTAAGGAGGCAG 5196
Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798
| |||| ||| |||| ||||| | || || |||||||| || ||||| || | ||||
Sbjct 5195 TATTGATGATGTCAAAGCCCACTTTCCCACCAAAGGTGCTAGGCTTCCAATACTCTGGGG 5136
Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858
|||||||| | || |||| || ||||| ||||| ||||| || || | ||| | |||
Sbjct 5135 AGCAGATGGCATTTCCCATCAGTCCTTTCAGGGAGAACGGCGCTCCAATCTCCACCATGG 5076
Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918
| ||||| ||||| || || || |||||||| || | | || | ||||| |||||
Sbjct 5075 TTTCACCAAAGATAGCACCTGGTCGTGGCTTTTCTACGAGAAGACCTGGGTACAGCTCCA 5016
Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTGT-T 8977
||| || |||||||| ||||| | ||||| || || ||||| |||||||||||
Sbjct 5015 TAGCATCAATGTCTCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCTGTAA 4956
Query 8978 TTATTAAT---AAAAATA--AAATG 8997
||||| || ||||||| |||||
Sbjct 4955 TTATTGATGAGAAAAATAGTAAATG 4931
Score = 125 bits (138), Expect = 1e-23
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681
||||| | || || || ||||| || || ||| ||| || ||||| || |||||||
Sbjct 3250 ATGAGCCTGGTAGTTTGGAACAGCTGCTCATCATCCCACTCAGGATGCTCCTGTTTCAGG 3191
Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741
| || || || | |||||||||||| ||||| || ||||| |||||||| | || ||
Sbjct 3190 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCTGGG 3131
Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801
|||| ||||| |||| || || |||| | ||| | ||| || || | |||||
Sbjct 3130 ACCAAACCAAACACCTCCTGCCCAACAGAAAACTGCAGGTGTTCAGGTACATGAGGAGGG 3071
Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATC 9861
|||||||| | |||| || || |||| || ||||||||||| || ||||| |||
Sbjct 3070 TAGATCATCTCTGCCTGAGTGTCCTTCACCGTTGGTGGATACATTTCTCCATCAATCATC 3011
Query 9862 TG 9863
||
Sbjct 3010 TG 3009
Score = 96.9 bits (106), Expect = 5e-15
Identities = 118/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 10289 ACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTA 10348
|||||| || || | || ||||| || || || || || || || | |||| |||
Sbjct 1396 ACCTTTAACACCCATCGGTGTTGGGCAGTCATGTCCTACTGGTGGAAGGCTTCTTGTGTA 1337
Query 10349 ATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATGGG 10408
||||||||| ||||| |||||||||||||| ||| | ||| || |||||| | ||
Sbjct 1336 ATAGGAGAGGTTGGAATAAGCTTCCCAGCTTTTGTAATTGTAATCACTGTTGTATGTTGG 1277
Query 10409 AGGGCTGTCAATCAAATCGGATCTACCTGAACAAGCAAAAG 10449
|||||||||||||| | ||||| ||||| ||| ||||
Sbjct 1276 TGGGCTGTCAATCAAGTGGGATCGTGCTGAAAAAGAGAAAG 1236
>seq51733
Length=8811
Score = 98.7 bits (108), Expect = 1e-15
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798
|||| || ||| |||| || |||| || || || ||||| |||||||| | ||||
Sbjct 8409 TCTTAACTATCTCAAAGCCAGTTGCTCCACCAAACGTACTGGGCTTCCAGTACTCTGGGG 8468
Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858
|||||||| ||| | | || || || |||||||| ||||| || | ||| | ||||
Sbjct 8469 AGCAGATGGGGTTTCCAAAAAGCCCCTTCAGGGAAAATGGAGCTCCAATCTCCACCATGC 8528
Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918
| || || || || | ||||| |||| || || | || || || | || |||||||
Sbjct 8529 TTTCCCCAAAAATACCATTGGGTTGGGGTTTCTCAAGCAGCAAGCCTGGATAAAACTCCA 8588
Query 8919 CAGCCTCGATGTCTCCGTAAAG 8940
||| || |||||||| || ||
Sbjct 8589 GAGCATCAATGTCTCCATAGAG 8610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708050982896560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |