Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq43608 102 9e-17 >seq43608 Length=19049 Score = 102 bits (112), Expect = 9e-17 Identities = 111/146 (76%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 21488 CAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAAT 21547 |||| || |||| |||| || || || | |||||||||||| || | || ||||||||| Sbjct 3266 CAATTCATACCT-CATCTCTGCTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAAT 3208 Query 21548 CCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACG 21607 ||||| || || | |||||| || || ||||| | || |||||||| || || || || Sbjct 3207 CCTCTTTTCTTCAGCCAAAAAATAGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACT 3148 Query 21608 GCAGCAAATGCAACTAATCGTTCACC 21633 || ||||| || |||| ||||| || Sbjct 3147 GCTGCAAAAGCTACTACACGTTCTCC 3122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531545097988760