Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq26544 132 6e-26
seq43608 111 2e-19
seq36225 102 1e-16
>seq26544
Length=14703
Score = 132 bits (146), Expect = 6e-26
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
|||| ||||| ||||| ||||| ||||| || || ||||| ||||| ||||| | ||| |
Sbjct 8178 CCTCATCTCTGCTAATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 8237
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445
| ||||||||||| | ||| || || || ||||||||||| ||||| |||||||||||||
Sbjct 8238 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 8297
Query 33446 CAATAAGTCTCTCTCC 33461
||| | |||||| ||
Sbjct 8298 CAACCACTCTCTCACC 8313
Score = 82.4 bits (90), Expect = 1e-10
Identities = 71/88 (81%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 33691 TTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATAT 33750
|||||||| || ||||| |||||||||||||||||||||| || || || || |||
Sbjct 12843 TTTTCATTTACAATTCCATCACTGGCTGCAAAAAACGCCAGGACGTGCGAGATGAAGTAT 12902
Query 33751 TTTTCGTCTGGTGTTAGTTTATTCCAAT 33778
||||| |||| | | || ||||||||||
Sbjct 12903 TTTTCATCTGCTTTCAGCTTATTCCAAT 12930
>seq43608
Length=19049
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385
|||| ||||| || || ||||| || ||||| |||||||| ||||||| || | || |
Sbjct 3257 CCTCATCTCTGCTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 3198
Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445
| |||||||| || || || || || |||||||||||||||||||| ||||| ||||| |
Sbjct 3197 TCAGCCAAAAAATAGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 3138
Query 33446 C 33446
|
Sbjct 3137 C 3137
Score = 86.0 bits (94), Expect = 8e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 32998 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 33057
||||| |||||||| | || |||||||||||||| || || || ||||| || || |||
Sbjct 4508 GACATGACTCCCATCCTCTGATATTCACCCACACGCTTCTCAAAGAAATTGGTCTTGCCT 4449
Query 33058 TCCAATGATATATTTTCCATGAAATCAAACGGATT 33092
|||| || || || |||||||| ||||| |||||
Sbjct 4448 TCCAGAGAGATGTTCTCCATGAAGTCAAAAGGATT 4414
>seq36225
Length=28417
Score = 102 bits (112), Expect = 1e-16
Identities = 122/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014
|||| || | ||| |||||||||||||| || || || ||||| || ||||| || || |
Sbjct 1276 CACTGAAGACTTTCTTTGTTTCCTTGTGCAGGTTGGACACGGCGATCCTGGCCGCCAGGA 1217
Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074
|||| || || || || | || || ||||| ||| | ||||| ||||| |||||||
Sbjct 1216 TGGCGTAGTCGGGGTGCTTGGTGGTCAGGGTGGCGGCTGTCTCGGCAGCCAGCGTGTCCA 1157
Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120
|| ||||| || || || | || | || ||||| ||||||||
Sbjct 1156 GCTCCACCGTGGTGACGCCGCTGTACAGCCCCTGAATCACCTTCAT 1111
Score = 93.3 bits (102), Expect = 5e-14
Identities = 123/171 (72%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121
|||| ||||| || ||||| || || |||||| ||| | || || || || ||||| |
Sbjct 17208 TCCAGCCGTAGAAGTGCATGCTGGTGAGTTTGCCATAGTTGGGTTCGGCGATGTGGATGT 17149
Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181
| | ||| || || ||||||||||| ||||| ||||| || ||||| || | ||| || |
Sbjct 17148 TGAGAGACTGGCTCTGATCGATGAAAGCTCCTCTGTCCGCTGCCATCTTGAGGATGGTTT 17089
Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232
| || | || ||||| | || ||||| | |||| | || || ||||
Sbjct 17088 TCTGGGAGATCTCCCACACTGTCTTATAGAGCTGCTTCAAGTCATCAGGAA 17038
Score = 87.8 bits (96), Expect = 2e-12
Identities = 109/147 (74%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275
|| || ||||| ||||||||||| ||||| || || | || || |||| || || ||
Sbjct 8182 ACCCGCTTCATGAAGAGATCAGGGATCCAGAGGGCAAAGAAAAGGTCTCGGGCTCGCTGC 8123
Query 63276 TCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334
|| || || || || ||||| |||||| || |||||| | | || || |||||||||
Sbjct 8122 TCTTCTTTCCCAGTGTTCTTCTTTAAG-TCAAGGAACTCAAAGATGTCCAGATGCCACGG 8064
Query 63335 TTCCAAGTATATGGCCATAACTCCAGG 63361
|||||||| ||||| | | | |||||
Sbjct 8063 CTCCAAGTAGATGGCAAAAGCCCCAGG 8037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622530611846840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |