Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq51860 98.7 9e-16 seq40465 84.2 2e-11 >seq51860 Length=4005 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | ||||| || | |||||| | ||| | || | | Sbjct 3651 ATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACAATCACCCTGGAAGTTGAGCCCAGT 3592 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||| ||||| ||||| || || |||||||| Sbjct 3591 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAG 3532 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | | ||||| || || ||||||| | | | | |||||| ||| Sbjct 3531 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 3472 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || || ||| ||||||| || ||| | || ||||| || Sbjct 3471 ATCCAGAAGGAGTCCACTCTCCATCTTGTGCTGCGCCTGAGAGGTGG 3425 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | || || || || ||||||| || | || ||| | ||| | || | Sbjct 3882 AAAATGCAGATCTTCGTGAAGACCCTAACTGGTAAGACCATTACCCTGGAAGTTGAGCCC 3823 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 | |||||||||||| | || || ||||| ||||| ||||| || || |||||| Sbjct 3822 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGAT 3763 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || || || || | | ||||| || || ||||||| | | | | |||||| Sbjct 3762 CAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTAC 3703 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || ||||| || | || |||| ||| | || ||||| || Sbjct 3702 AACATCCAGAAGGAATCCACCCTGCACTTGGTGCTGCGCCTGAGAGGTGG 3653 >seq40465 Length=31615 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| || || || || | ||| || |||||||||||||| ||||| || ||||||||| Sbjct 2497 GAGGGCAAGATGCATGGCTTCCTGCGAATGTACTGGGCCAAGAAGATCCTGGAGTGGACT 2556 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 | | |||||| |||| || || | | || || || ||||| | ||| || ||| Sbjct 2557 CGCTCCCCCGAGGAGGCCCTGCGGTTTGCCATCTACCTCAACGACCGCTACGAGCTGGAC 2616 Query 71837 GGTCGCGATCCTAACGGTTATGTCGG 71862 || | ||||| ||||| || || || Sbjct 2617 GGGAGGGATCCCAACGGATACGTAGG 2642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478342300503280