Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq37467 98.7 9e-16 >seq37467 Length=38624 Score = 98.7 bits (108), Expect = 9e-16 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| || || | || || |||||||||||||| || || ||||||| ||| Sbjct 3620 TGGGCAATCATGTAGGTGAGCAGTGAGTAGCTGGCAATGTTGAAGGGCACTCCCAGTCCC 3561 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCA-CCGTCAGCTACATAAAATTG 20367 ||||| || |||||||| || ||||| ||||| || ||| || ||||| || || || || Sbjct 3560 ATGTCCCCAGACCTCTGGTAGAGCTGGCAGGAGAGTTCACCCTTCAGC-ACGTAGAACTG 3502 Query 20368 ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACA 20405 || | ||| || || || || ||||||| |||| Sbjct 3501 GCACAGGGCGTGGCACGGGGGCAGAGCCATCAGAGACA 3464 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 20521 GTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||| ||| | || |||||||||||||||||||| || || || || |||| ||||| Sbjct 1600 GTCCTTGTAGTCTGCTCCAAAGTGCCTCCACTGGAAGCCATACACTGGCCCCAGGTCCCC 1541 Query 20581 CTCCCTTCTGTGCGC-CAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCC 20639 |||| ||| | || | ||| || | |||||||||||| ||| || || ||||| Sbjct 1540 CTCCTCCCTG-GAGCTGAAGCCCTGCTTGTCCAGGAACTCCCGGGACCCGTTAGCGTCCC 1482 Query 20640 ATATCTTGACTCCTGTTCTTGAAAGCTCCCTGG 20672 | ||||| || ||| || || |||||| ||| Sbjct 1481 AGATCTTCACACCTTTTGCAGAGAGCTCCTTGG 1449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441077637457160