Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq51860 140 8e-28
>seq51860
Length=4005
Score = 140 bits (154), Expect = 8e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||| |||||||| |||||||| |||| ||||||||| | || || | ||||||
Sbjct 3439 CAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 3498
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || || ||||| ||
Sbjct 3499 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTC 3558
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| |||| |||||| | | || || |||| ||||| ||
Sbjct 3559 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGT 3618
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || ||||||||||| || ||
Sbjct 3619 CTTGCCAGTCAGGGTTTTCACAAAGATCTG 3648
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||| |||||||| |||||||| |||| ||||||||| | || || | ||||||
Sbjct 3211 CAGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 3270
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || || ||||| ||
Sbjct 3271 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTC 3330
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| || | |||||| | | || || |||| ||||| ||
Sbjct 3331 CTGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGT 3390
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || |||||||| || ||
Sbjct 3391 CTTGCCAGTCAGGGTCTTCACAAAGATCTG 3420
Score = 114 bits (126), Expect = 3e-20
Identities = 157/219 (72%), Gaps = 3/219 (1%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| || | ||| || || || ||||| |||| ||||||||| | || || | ||||||
Sbjct 3667 CAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATC 3726
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | |||||| || || || ||||| ||
Sbjct 3727 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTC 3786
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| |||||| |||| |||||| | | || || |||| || || ||
Sbjct 3787 CTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTAATGGT 3846
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|||||| || || || ||||| || || || ||||||
Sbjct 3847 CTTACCAGTTAGGGTCTTCACGAAGATCTG---CATTTT 3882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178113501189433
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |