Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq51860 143 3e-29
seq26544 87.8 2e-12
seq43608 84.2 2e-11
>seq51860
Length=4005
Score = 143 bits (158), Expect = 3e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||||||||| || ||||| || || || || || || ||||| ||| | || || ||| |
Sbjct 3883 AAAAATGCAGATCTTCGTGAAGACCCTAACTGGTAAGACCATTACCCTGGAAGTTGAGCC 3824
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|| |||| | | | | | || | || |||| ||||| || || || ||| ||||
Sbjct 3823 CAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGA 3764
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||| |||| || | || ||||| |||||||| || | |||||||| ||||||
Sbjct 3763 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTA 3704
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||| |||||| | || ||||| ||||||||||| ||||||| |||
Sbjct 3703 CAACATCCAGAAGGAATCCACCCTGCACTTGGTGCTGCGCCTGAGAGGTGGC 3652
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| || || ||||| || |||||| | || || ||| |||
Sbjct 3651 ATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACAATCACCCTGGAAGTTGAGCCCAGT 3592
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| || || || ||| |||| ||
Sbjct 3591 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAG 3532
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || ||||| |||||||| || | |||||||| ||||||||||
Sbjct 3531 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 3472
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || || ||| | |||||||| ||||||| |||
Sbjct 3471 ATCCAGAAGGAGTCCACTCTCCATCTTGTGCTGCGCCTGAGAGGTGGC 3424
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| || |||||| | || || ||| |||
Sbjct 3423 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACAATCACCCTGGAAGTTGAGCCCAGT 3364
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| || || || ||| |||| ||
Sbjct 3363 GACACCATTGAGAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAG 3304
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || ||||| |||||||| || | |||||||| ||||||||||
Sbjct 3303 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 3244
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| | || || ||| | ||||||||| ||||||| ||
Sbjct 3243 ATCCAGAAGGAGTCCACTCTCCATCTTGTGCTGCGTCTGAGAGGTGG 3197
>seq26544
Length=14703
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
|||| || ||| ||||||||| ||| |||||||| || ||||| ||||| | || |
Sbjct 8178 CCTCATCTCTGCTAATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 8237
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||||||||| || || || ||||||||||||| ||| || || || || || |
Sbjct 8238 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 8297
Query 133037 CCACCA 133042
| ||||
Sbjct 8298 CAACCA 8303
>seq43608
Length=19049
Score = 84.2 bits (92), Expect = 2e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGA 133454
||||||||| | ||||| || || |||||||| || |||||||| ||| || ||
Sbjct 118 CACCTCCTCCGCCGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATATCGTG 59
Query 133455 ATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508
|| || ||||| || || || || ||||||||||| || |||| |||||||||
Sbjct 58 GTACTGGATGGGGAAGATGACGAAGCGGCGGGGGTTGTCCCGCAGCAGCGGCTC 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499838315692160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |