Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq42192 93.3 5e-14 seq17549 93.3 5e-14 seq36225 89.7 6e-13 seq22476 89.7 6e-13 seq43608 82.4 9e-11 >seq42192 Length=734 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 181 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 123 >seq17549 Length=133662 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 26949 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 26891 >seq36225 Length=28417 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||||||||| | |||||||| |||| | || |||||||| ||||| || |||||||| Sbjct 14754 GTAGATGTTGCTGGTGTAGGGCTCGATGGATTCGTTGTTGCCCAGGATCTGAGCAGTGGA 14695 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 |||||| |||||||| | ||||| || ||||| | || ||| Sbjct 14694 AGCTGTTGGCATGGGTGAAATGAGGAGGCTGTTCCTGACACC 14653 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 110316 CTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACC 110375 ||| |||||| |||||| |||| || || || || | |||| | ||| ||| || Sbjct 9970 CTCATCTTTGCTGGTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCC 9911 Query 110376 CAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACC 110435 || ||||| ||| || ||| |||||| | ||||| ||||||||||| ||||| || Sbjct 9910 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCC 9851 Query 110436 AGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 || || ||||| |||| || ||||| | ||| Sbjct 9850 GGTCTCGGTCTGCGACTCGATGATGGCGTACCA 9818 >seq22476 Length=20326 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 168430 TTACCACGGAGTGGAAATACCCCATAATGATCTCTACCCACGACGGAGAGACCAGCGACA 168489 || ||||| || ||||| || ||||| | |||||||| || || ||||||| |||| Sbjct 15784 TTCCCACGAAGAGGAAACACTCCATACTTGTCTCTACCAACCACTCCAAGACCAGAGACA 15843 Query 168490 GCGAGAGTTTTCGCTGAATCACCCTCTGTCACGATGAGTGTACA 168533 || || ||||| ||||| || ||||| |||| |||||||||||| Sbjct 15844 GCCAGTGTTTTGGCTGAGTCTCCCTCGGTCAGGATGAGTGTACA 15887 >seq43608 Length=19049 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266 ||| |||||||| | ||| || |||||||| ||||| || || || |||||||| ||||| Sbjct 4488 ATATTCACCCACACGCTTCTCAAAGAAATTGGTCTTGCCTTCCAGAGAGATGTTCTCCAT 4429 Query 119267 AAAGTCAAAAGGATT 119281 |||||||||||||| Sbjct 4428 GAAGTCAAAAGGATT 4414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588582129662200