Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq30680 107 2e-17 >seq30680 Length=3589 Score = 107 bits (118), Expect = 2e-17 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | ||||||||||| || || || || || || ||||| ||||| Sbjct 2295 GTTACCAATGCTGTTGTGACTGTACCAGCCTACTTCAACGATTCTCAGCGTCAGGCTACA 2236 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| |||||| || || ||||| || || || ||||| || || || ||| Sbjct 2235 AAAGATGCTGGAACTATTGCAGGGCTCAATGTCCTGCGAATCATCAACGAGCCAACAGCT 2176 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| | || ||||| || || ||| Sbjct 2175 GCTGCCATAGCCTATGGTCTGGACAAA 2149 Score = 91.5 bits (100), Expect = 1e-12 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGC 552565 ||||||||| |||||||| | || ||||| || |||||||| || |||||||| ||||| Sbjct 584 AGGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTCGATATTGATGC 525 Query 552566 CAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||||| || |||||||| ||||| ||||| Sbjct 524 CAATGGTATCCTGAATGTGTCTGCTGTGGATAA 492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026466731599510